RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 COL20A1Q9P218 1284 aa16.54■□□□□ 0.24
TPGS1-202ENST00000588278 SYNGAP1Q96PV0 1343 aa16.54■□□□□ 0.24
TPGS1-202ENST00000588278 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
TPGS1-202ENST00000588278 SLC16A4O15374 487 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 SPOPO43791 374 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 ECEL1O95672 775 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 CALCAP01258 141 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 CYP3A4P08684 503 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 LMNB1P20700 586 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 CTNNA2P26232 953 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 CNGA1P29973 690 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 ITGA8P53708 1063 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 SOX10P56693 466 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 PLA2G4FQ68DD2 849 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 RNF207Q6ZRF8 634 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 PPM1KQ8N3J5 372 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 SLC5A5Q92911 643 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 FAM136AQ96C01 138 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 SERPINB12Q96P63 405 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 FGFR1P11362 822 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 YY1P25490 414 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 HOXA7P31268 230 aaPredicted RBP16.53■□□□□ 0.24
TPGS1-202ENST00000588278 CACNA2D1P54289 1103 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 PEX3P56589 373 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 BFSP1Q12934 665 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 EAPPQ56P03 285 aaPredicted RBP16.53■□□□□ 0.24
TPGS1-202ENST00000588278 STXBP4Q6ZWJ1 553 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 UBL4BQ8N7F7 174 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 RBBP8NLQ8NC74 664 aaPredicted RBP16.53■□□□□ 0.24
TPGS1-202ENST00000588278 PRR11Q96HE9 360 aaPredicted RBP16.53■□□□□ 0.24
TPGS1-202ENST00000588278 NPHS2Q9NP85 383 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 UBN1Q9NPG3 1134 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 APEX2Q9UBZ4 518 aa16.53■□□□□ 0.24
TPGS1-202ENST00000588278 HERC5Q9UII4 1024 aaKnown RBP16.53■□□□□ 0.24
TPGS1-202ENST00000588278 TESPA1A2RU30 521 aaPredicted RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 ACADSP16219 412 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 SSR1P43307 286 aaKnown RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 SCNN1BP51168 640 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 KPNB1Q14974 876 aaKnown RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 ARHGEF18Q6ZSZ5 1173 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 ARHGAP22Q7Z5H3 698 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 MTDHQ86UE4 582 aaKnown RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 ARHGEF19Q8IW93 802 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 DAW1Q8N136 415 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 AGGF1Q8N302 714 aaeCLIP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 RUNDC3BQ96NL0 473 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 FIZ1Q96SL8 496 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 STK33Q9BYT3 514 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 ALG13Q9NP73 1137 aaKnown RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 NINJ2Q9NZG7 142 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 PARP2Q9UGN5 583 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 FOCADQ5VW36 1801 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 PIK3CDO00329 1044 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 CAPN9O14815 690 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 TTC4O95801 387 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 PPP2R5CQ13362 524 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 FAM102BQ5T8I3 360 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 SLC13A5Q86YT5 568 aaPredicted RBP16.52■□□□□ 0.24
TPGS1-202ENST00000588278 KBTBD2Q8IY47 623 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 HERPUD2Q9BSE4 406 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 MRIQ9BWK5 157 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 SCOCQ9UIL1 159 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 WASF2Q9Y6W5 498 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 ZHX2Q9Y6X8 837 aa16.52■□□□□ 0.24
TPGS1-202ENST00000588278 GSTTP1A0A1W2PQM5 241 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 POC1B-GALNT4F8VUJ3 575 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 VIL1P09327 827 aaKnown RBP16.52■□□□□ 0.23
TPGS1-202ENST00000588278 NEK3P51956 506 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 PPP3CAQ08209 521 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 STRN3Q13033 797 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 CUL3Q13618 768 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 LBRQ14739 615 aaKnown RBP16.52■□□□□ 0.23
TPGS1-202ENST00000588278 PARP6Q2NL67 630 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 ROPN1BQ9BZX4 212 aaPredicted RBP16.52■□□□□ 0.23
TPGS1-202ENST00000588278 EHMT1Q9H9B1 1298 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 ROPN1Q9HAT0 212 aaPredicted RBP16.52■□□□□ 0.23
TPGS1-202ENST00000588278 PPP1R1BQ9UD71 204 aaPredicted RBP16.52■□□□□ 0.23
TPGS1-202ENST00000588278 USP20Q9Y2K6 914 aa16.52■□□□□ 0.23
TPGS1-202ENST00000588278 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.52■□□□□ 0.23
TPGS1-202ENST00000588278 C2orf71A6NGG8 1288 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 SKIV2L2P42285 1042 aaKnown RBP16.51■□□□□ 0.23
TPGS1-202ENST00000588278 MTM1Q13496 603 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 SIX1Q15475 284 aaPredicted RBP16.51■□□□□ 0.23
TPGS1-202ENST00000588278 PPP2R5EQ16537 467 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 ACSBG2Q5FVE4 666 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 RSBN1LQ6PCB5 846 aaPredicted RBP16.51■□□□□ 0.23
TPGS1-202ENST00000588278 BRWD3Q6RI45 1802 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 ITFG2Q969R8 447 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 LARSQ9P2J5 1176 aaKnown RBP16.51■□□□□ 0.23
TPGS1-202ENST00000588278 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 ANKRD62A6NC57 917 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 EIF3DO15371 548 aaKnown RBP eCLIP16.51■□□□□ 0.23
TPGS1-202ENST00000588278 SPATA31D3P0C874 917 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 SPATA31D4Q6ZUB0 917 aa16.51■□□□□ 0.23
TPGS1-202ENST00000588278 TRMT10CQ7L0Y3 403 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms