RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 ADSSP30520 456 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 HOXA9P31269 272 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 ARPP19P56211 112 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 NTHL1P78549 312 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 GET4Q7L5D6 327 aaPredicted RBP23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 TSPAN18Q96SJ8 248 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 KCNK12Q9HB15 430 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 OLFML3Q9NRN5 406 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 POLIQ9UNA4 740 aa23.31■■□□□ 1.32
PPP4R1-228ENST00000584074 XPOTO43592 962 aaKnown RBP23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 NFICP08651 508 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 UVSSAQ2YD98 709 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 L1TD1Q5T7N2 865 aaKnown RBP23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 SPATA1Q5VX52 437 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 CD302Q8IX05 232 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 FBXL6Q8N531 539 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 APPL2Q8NEU8 664 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 ZNF461Q8TAF7 563 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 POMGNT1Q8WZA1 660 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 ACCSQ96QU6 501 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 EPS15L1Q9UBC2 864 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 FBXL5Q9UKA1 691 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 PCDHB8Q9UN66 801 aa23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.3■■□□□ 1.32
PPP4R1-228ENST00000584074 MTCL1Q9Y4B5 1905 aaKnown RBP23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 WDR27A2RRH5 827 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 PPEF2O14830 753 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 XYLBO75191 536 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 ABLIM3O94929 683 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 PDGFBP01127 241 aaPredicted RBP23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 FSHRP23945 695 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 TDGQ13569 410 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 CTXN3Q4LDR2 81 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 CRELD2Q6UXH1 353 aaPredicted RBP23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 BEST2Q8NFU1 509 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 KCNG4Q8TDN1 519 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 RSAD2Q8WXG1 361 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 DHX58Q96C10 678 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 TNMDQ9H2S6 317 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 KBTBD4Q9NVX7 518 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.29■■□□□ 1.325e-13■■□□□ 11.6
PPP4R1-228ENST00000584074 EXOC7Q9UPT5 735 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 PCDHB13Q9Y5F0 798 aa23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 TIMM13Q9Y5L4 95 aaPredicted RBP23.29■■□□□ 1.32
PPP4R1-228ENST00000584074 PDCD11Q14690 1871 aaKnown RBP23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 MYH15Q9Y2K3 1946 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 M0QZQ0 153 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 PLA2G5P39877 138 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 AARSP49588 968 aaKnown RBP eCLIP23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 TMEM132DQ14C87 1099 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 ZNF280DQ6N043 979 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 SUGP1Q8IWZ8 645 aaKnown RBP23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 CCDC65Q8IXS2 484 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 FAM122AQ96E09 287 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 CUEDC2Q9H467 287 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 HCFC1R1Q9NWW0 138 aa23.28■■□□□ 1.32
PPP4R1-228ENST00000584074 LAMP2P13473 410 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 ME1P48163 572 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 DNM1Q05193 864 aaKnown RBP23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 POSTNQ15063 836 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 RTL10Q7L3V2 364 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 SYCP3Q8IZU3 236 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 IQUBQ8NA54 791 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 ZSWIM2Q8NEG5 633 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 HPS3Q969F9 1004 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 TRIM9Q9C026 710 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 ASB7Q9H672 318 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 IGSF9Q9P2J2 1179 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 PCDHA7Q9UN72 937 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 DERAQ9Y315 318 aa23.27■■□□□ 1.32
PPP4R1-228ENST00000584074 PRRG1O14668 218 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 PRPF6O94906 941 aaKnown RBP23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 SEC24AO95486 1093 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 POU2F2P09086 479 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 ATF2P15336 505 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 ELF1P32519 619 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 LILRA4P59901 499 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 ALCAMQ13740 583 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 C9orf57Q5W0N0 161 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 ATL3Q6DD88 541 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 DSTYKQ6XUX3 929 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 GLIS3Q8NEA6 775 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 ST13P5Q8NFI4 369 aaPredicted RBP23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 FAM213AQ9BRX8 229 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 LRRC27Q9C0I9 530 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 CYP4F11Q9HBI6 524 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 DNMT3BQ9UBC3 853 aaKnown RBP23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 C2CD2Q9Y426 696 aa23.26■■□□□ 1.31
PPP4R1-228ENST00000584074 SPTLC1O15269 473 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 POLR2DO15514 142 aaKnown RBP23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 NARSO43776 548 aaKnown RBP23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 OAZ2O95190 189 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 YWHAHQ04917 246 aaPredicted RBP23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 IER5LQ5T953 404 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 TPGS2Q68CL5 300 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 TCEAL8Q8IYN2 117 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 ITFG1Q8TB96 612 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 SAAL1Q96ER3 474 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 CFAP45Q9UL16 551 aa23.25■■□□□ 1.31
PPP4R1-228ENST00000584074 MYO10Q9HD67 2058 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms