RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 DMXL1Q9Y485 3027 aa8.62□□□□□ -1.03
SMCHD1-210ENST00000583800 ZMYM2Q9UBW7 1377 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 CEP250Q9BV73 2442 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 A0A1B0GUA9 196 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 H3BM21 787 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PTGESO14684 152 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 CCL16O15467 120 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 ADAM12O43184 909 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 EPB41L2O43491 1005 aaKnown RBP8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 ICMTO60725 284 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PFKFB2O60825 505 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 C1RP00736 705 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 C8AP07357 584 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 SP9P0CG40 484 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 FDPSP14324 419 aaKnown RBP8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 TXKP42681 527 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 GPC5P78333 572 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 SF3A1Q15459 793 aaKnown RBP8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PSMD5Q16401 504 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PPM1LQ5SGD2 360 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 LIN9Q5TKA1 542 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 FAM171A1Q5VUB5 890 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 TRIM46Q7Z4K8 759 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 C1orf210Q8IVY1 113 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 GPR65Q8IYL9 337 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PJA1Q8NG27 643 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 LNX1Q8TBB1 728 aaPredicted RBP8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 ASB16Q96NS5 453 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 HINFPQ9BQA5 517 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 CLSTN3Q9BQT9 956 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 TTPALQ9BTX7 342 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PDZD7Q9H5P4 517 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 TTC12Q9H892 705 aaPredicted RBP8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 SNTG2Q9NY99 539 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 CDH7Q9ULB5 785 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 PCDHA12Q9UN75 941 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 POLIQ9UNA4 740 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 USP20Q9Y2K6 914 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 DNAH14Q0VDD8 3507 aa8.61□□□□□ -1.03
SMCHD1-210ENST00000583800 TICRRQ7Z2Z1 1910 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 MED19A0JLT2 244 aaPredicted RBP8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 NEMFO60524 1076 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 RECQL4O94761 1208 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 LARGE1O95461 756 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 EDN1P05305 212 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 LIG1P18858 919 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 STARD6P59095 220 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 SNW1Q13573 536 aaKnown RBP8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 CDCA2Q69YH5 1023 aaPredicted RBP8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 ZC3H14Q6PJT7 736 aaKnown RBP8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 MAML2Q8IZL2 1156 aaPredicted RBP8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 DCLK2Q8N568 766 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 PLPP7Q8NBV4 271 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 ITFG1Q8TB96 612 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 SLC7A14Q8TBB6 771 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 PIK3R5Q8WYR1 880 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 BSNDQ8WZ55 320 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 WASF1Q92558 559 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 FGF13Q92913 245 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 PRIMPOLQ96LW4 560 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 SEMA4AQ9H3S1 761 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 BRMS1Q9HCU9 246 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 PRMT7Q9NVM4 692 aaPredicted RBP8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 HCFC1R1Q9NWW0 138 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 MYH11P35749 1972 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 COL4A2P08572 1712 aa8.6□□□□□ -1.03
SMCHD1-210ENST00000583800 GPR179Q6PRD1 2367 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 KANSL1LA0AUZ9 987 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 BTBD18B2RXH4 712 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 N4BP3O15049 544 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 MED24O75448 989 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 DKK1O94907 266 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 PRKCBP05771 671 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 THP07101 528 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 HNRNPA1P09651 372 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 SPATA31C1P0DKV0 1188 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 JUNDP17535 347 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 ATP2B1P20020 1258 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 IGFBP6P24592 240 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 HOXA9P31269 272 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 MCCD1P59942 119 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 CLDN10P78369 228 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 UBXN2BQ14CS0 331 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 NAB2Q15742 525 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 MLF2Q15773 248 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 ECM1Q16610 540 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 OCLNQ16625 522 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 FAM187BQ17R55 369 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 GLRA4Q5JXX5 417 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 EEF1DP3Q658K8 133 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 MTSS1LQ765P7 747 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 ZBTB8OSQ8IWT0 167 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 NECAB1Q8N987 351 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 ING5Q8WYH8 240 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 MTMR9Q96QG7 549 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 KXD1Q9BQD3 176 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 TMEM60Q9H2L4 133 aa8.59□□□□□ -1.03
SMCHD1-210ENST00000583800 FZD8Q9H461 694 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms