RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 HSD3B2P26439 372 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 CNGA1P29973 690 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 GLCCI1Q86VQ1 547 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 RHOT1Q8IXI2 618 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 WDR66Q8TBY9 1149 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 NRG4Q8WWG1 115 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 C7orf25Q9BPX7 421 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 RB1CC1Q8TDY2 1594 aa5.54□□□□□ -1.52
SMCHD1-208ENST00000583344 INO80B-WBP1J3KQ70 363 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 PEX1O43933 1283 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 IGSF3O75054 1194 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 AGXTP21549 392 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 NHLH1Q02575 133 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 CREMQ03060 361 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 DACT2Q5SW24 774 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 SDE2Q6IQ49 451 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 TMEM125Q96AQ2 219 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 MED15Q96RN5 788 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 INO80BQ9C086 356 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 C11orf54Q9H0W9 315 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 ZNF277Q9NRM2 450 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 VSX1Q9NZR4 365 aaPredicted RBP5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 SLC17A6Q9P2U8 582 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 INTUQ9ULD6 942 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 CDYLQ9Y232 598 aa5.53□□□□□ -1.52
SMCHD1-208ENST00000583344 WASHC2AQ641Q2 1341 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 HAUS5O94927 633 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 SBK3P0C264 359 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 CPEP16870 476 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 FOXF2Q12947 444 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 TARDBPQ13148 414 aaKnown RBP eCLIP5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 AKNAD1Q5T1N1 836 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 NAF1Q96HR8 494 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 HEPHQ9BQS7 1158 aa5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 TMA7Q9Y2S6 64 aaKnown RBP5.52□□□□□ -1.53
SMCHD1-208ENST00000583344 GRM6O15303 877 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 YY2O15391 372 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 AGFG2O95081 481 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 PROK1P58294 105 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 KRTAP10-11P60412 298 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 CTXN1P60606 82 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 TMX3Q96JJ7 454 aa5.51□□□□□ -1.53
SMCHD1-208ENST00000583344 VIL1P09327 827 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 FOLR3P41439 243 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 MAPK10P53779 464 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 ATXN1P54253 815 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 KLF1Q13351 362 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 CLUL1Q15846 466 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 VWA1Q6PCB0 445 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 TSHZ1Q6ZSZ6 1077 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 KRT26Q7Z3Y9 468 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 PEG10Q86TG7 708 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 SRRM1Q8IYB3 904 aaKnown RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 NLGN4YQ8NFZ3 816 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 ATL2Q8NHH9 583 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 TFAP2BQ92481 460 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 LPIN2Q92539 896 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 UROC1Q96N76 676 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 USP35Q9P2H5 1018 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 ARPP21Q9UBL0 812 aaPredicted RBP5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 PCDHA13Q9Y5I0 950 aa5.5□□□□□ -1.53
SMCHD1-208ENST00000583344 A0A1W2PS29 197 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 K7ESF4 209 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 POU3F3P20264 500 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 GATA3P23771 443 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 ATP2B3Q16720 1220 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 CD300EQ496F6 205 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 UTP14CQ5TAP6 766 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 PAPD7Q5XG87 772 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 KIAA0895LQ68EN5 471 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 RSPH3Q86UC2 560 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 AMOTL1Q8IY63 956 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 SH2D3CQ8N5H7 860 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 NSUN7Q8NE18 718 aaKnown RBP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 SLC30A5Q8TAD4 765 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 FBXL20Q96IG2 436 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 TDP1Q9NUW8 608 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 CTTNBP2NLQ9P2B4 639 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 TUBD1Q9UJT1 453 aa5.49□□□□□ -1.53
SMCHD1-208ENST00000583344 PRAMEF33A0A0G2JMD5 474 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 PRAMEF10O60809 474 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 PROP1O75360 226 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 ELFN1P0C7U0 828 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 SRGNP10124 158 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 KCNA2P16389 499 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 ABCG1P45844 678 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 MC2RQ01718 297 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 FLYWCH1Q4VC44 716 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 KAZNQ674X7 775 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 ZNF788Q6ZQV5 615 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 CLNKQ7Z7G1 428 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 TOR1AIP2Q8NFQ8 470 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 IFI44Q8TCB0 444 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 KLHL32Q96NJ5 620 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 CPNE5Q9HCH3 593 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 INTS13Q9NVM9 706 aa5.48□□□□□ -1.53
SMCHD1-208ENST00000583344 SLC45A2Q9UMX9 530 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms