RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 GUCY1B3Q02153 619 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 PPP2R5DQ14738 602 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 CYP4A22Q5TCH4 519 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 VITQ6UXI7 678 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 DEPDC1BQ8WUY9 529 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 SMARCD2Q92925 531 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 CNTNAP3BQ96NU0 1288 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 LLPHQ9BRT6 129 aaKnown RBP14.85□□□□□ -0.03
SS18-222ENST00000582792 MRPL4Q9BYD3 311 aaKnown RBP14.85□□□□□ -0.03
SS18-222ENST00000582792 CNTNAP3Q9BZ76 1288 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 TMEM134Q9H6X4 195 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 ZNF334Q9HCZ1 680 aaPredicted RBP14.85□□□□□ -0.03
SS18-222ENST00000582792 PARD6AQ9NPB6 346 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 CNTN3Q9P232 1028 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 GMEB2Q9UKD1 530 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 USP18Q9UMW8 372 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 NUB1Q9Y5A7 615 aa14.85□□□□□ -0.03
SS18-222ENST00000582792 TICRRQ7Z2Z1 1910 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 CCDC169A6NNP5 214 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 MOSPD3O75425 235 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 MCF2P10911 925 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 PSMC3P17980 439 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 PROZP22891 400 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 GDI1P31150 447 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 RPL9P32969 192 aaKnown RBP14.84□□□□□ -0.03
SS18-222ENST00000582792 NPTX2P47972 431 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
SS18-222ENST00000582792 PEX3P56589 373 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 ST3GAL1Q11201 340 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 CTXN3Q4LDR2 81 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 IQCEQ6IPM2 695 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 TAS1R3Q7RTX0 852 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 HS6ST3Q8IZP7 471 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 ELMOD1Q8N336 334 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 FAM3CQ92520 227 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 SUSD3Q96L08 255 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 ZNF512Q96ME7 567 aaPredicted RBP14.84□□□□□ -0.03
SS18-222ENST00000582792 ZSWIM3Q96MP5 696 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 ACAP3Q96P50 834 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 RTKNQ9BST9 563 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 TARS2Q9BW92 718 aaKnown RBP14.84□□□□□ -0.03
SS18-222ENST00000582792 CEP72Q9P209 647 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 ARHGAP28Q9P2N2 729 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 AFF4Q9UHB7 1163 aaKnown RBP14.84□□□□□ -0.03
SS18-222ENST00000582792 KIAA1024Q9UPX6 916 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 PIAS3Q9Y6X2 628 aa14.84□□□□□ -0.03
SS18-222ENST00000582792 CITO14578 2027 aa14.83□□□□□ -0.03
SS18-222ENST00000582792 ABLIM1O14639 778 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 CCR3P51677 355 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 EPHA5P54756 1037 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 TWF1Q12792 350 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 TTC38Q5R3I4 469 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 LAIR1Q6GTX8 287 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 ZNF280DQ6N043 979 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 DAW1Q8N136 415 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 CELF5Q8N6W0 485 aaKnown RBP14.83□□□□□ -0.04
SS18-222ENST00000582792 LEMD2Q8NC56 503 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 APPL2Q8NEU8 664 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 SNX21Q969T3 373 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 C18orf25Q96B23 403 aaPredicted RBP14.83□□□□□ -0.04
SS18-222ENST00000582792 FOXP1Q9H334 677 aaPredicted RBP14.83□□□□□ -0.04
SS18-222ENST00000582792 LMAN1LQ9HAT1 526 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 TRPV4Q9HBA0 871 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 DDX19AQ9NUU7 478 aaKnown RBP14.83□□□□□ -0.04
SS18-222ENST00000582792 LRWD1Q9UFC0 647 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 RAB23Q9ULC3 237 aa14.83□□□□□ -0.04
SS18-222ENST00000582792 ZNF263O14978 683 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 MEFVO15553 781 aaPredicted RBP14.82□□□□□ -0.04
SS18-222ENST00000582792 HIP1RO75146 1068 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 MYL4P12829 197 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 MCM4P33991 863 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 VIPR2P41587 438 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 MLLT6P55198 1093 aaPredicted RBP14.82□□□□□ -0.04
SS18-222ENST00000582792 DMP1Q13316 513 aaPredicted RBP14.82□□□□□ -0.04
SS18-222ENST00000582792 MPZL3Q6UWV2 235 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 MFSD6LQ8IWD5 586 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 C4orf32Q8N8J7 132 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 ZSCAN18Q8TBC5 510 aaPredicted RBP14.82□□□□□ -0.04
SS18-222ENST00000582792 DDX12PQ92771 950 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 C8orf76Q96K31 380 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 TCHPQ9BT92 498 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 KMT5AQ9NQR1 393 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 ASAH2Q9NR71 780 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 RBM19Q9Y4C8 960 aaKnown RBP14.82□□□□□ -0.04
SS18-222ENST00000582792 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 NCANO14594 1321 aa14.82□□□□□ -0.04
SS18-222ENST00000582792 PDCD11Q14690 1871 aaKnown RBP14.82□□□□□ -0.04
SS18-222ENST00000582792 DCDC2BA2VCK2 349 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 ARNTLO00327 626 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 LRP3O75074 770 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 CHRNB1P11230 501 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 CPB1P15086 417 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 GJA1P17302 382 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 TRAPPC10P48553 1259 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 SPEM2Q0P670 501 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 MAPK7Q13164 816 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 PDIA5Q14554 519 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 LPAL2Q16609 132 aa14.81□□□□□ -0.04
SS18-222ENST00000582792 RNF19BQ6ZMZ0 732 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms