RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	IL2RB	P14784	551 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	DGCR2	P98153	550 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	TUBA3C	Q13748	450 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	NWD1	Q149M9	1564 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	ACAP2	Q15057	778 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	LSM12	Q3MHD2	195 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	RRP12	Q5JTH9	1297 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	GPRASP1	Q5JY77	1395 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	ATRNL1	Q5VV63	1379 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	ANKS6	Q68DC2	871 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	TUBA3E	Q6PEY2	450 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453		Q8N1X5	172 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	PPM1N	Q8N819	430 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	REPS2	Q8NFH8	660 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	ZFP28	Q8NHY6	868 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	CASKIN2	Q8WXE0	1202 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	TFAP2C	Q92754	450 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	ABCC11	Q96J66	1382 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	C8orf48	Q96LL4	319 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	C7orf25	Q9BPX7	421 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	NDC1	Q9BTX1	674 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	KCNH6	Q9H252	994 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	MANSC1	Q9H8J5	431 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	SPON1	Q9HCB6	807 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	TMEM140	Q9NV12	185 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	TUBD1	Q9UJT1	453 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	PCDHGA8	Q9Y5G5	932 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	PCDHGA7	Q9Y5G6	932 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	PCDHGA6	Q9Y5G7	932 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	PCDHGA3	Q9Y5H0	932 aa		4.08	□□□□□ -1.76
MSI2-215	ENST00000582453	LAMC1	P11047	1609 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	LTBP4	Q8N2S1	1624 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	FAM135B	Q49AJ0	1406 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	LRPPRC	P42704	1394 aa	Known RBP	4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	TONSL	Q96HA7	1378 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	TNKS	O95271	1327 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	ADGRF5	Q8IZF2	1346 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	CXorf49	A8MYA2	514 aa	Predicted RBP	4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	TEX33	O43247	280 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	TSPAN6	O43657	245 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	C5AR1	P21730	350 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	SLC6A9	P48067	706 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	NEK2	P51955	445 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	CLRN1	P58418	232 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	SLC25A3	Q00325	362 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	PCBP2	Q15366	365 aa	Known RBP eCLIP	4.07	□□□□□ -1.76	9e-7	■■■□□ 17.4
MSI2-215	ENST00000582453	PTPN21	Q16825	1174 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	EFCAB12	Q6NXP0	572 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	USP51	Q70EK9	711 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	PNMA8A	Q86V59	439 aa	Predicted RBP	4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	OR10H5	Q8NGA6	315 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	OR2I1P	Q8NGU4	316 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	SLC35B2	Q8TB61	432 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	TSR2	Q969E8	191 aa	Known RBP	4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	TEKT5	Q96M29	485 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	DCLRE1C	Q96SD1	692 aa	Known RBP	4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	CHMP4A	Q9BY43	222 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	SORCS3	Q9UPU3	1222 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	SIK3	Q9Y2K2	1263 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	STRC	Q7RTU9	1775 aa		4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	POLR1A	O95602	1720 aa	Predicted RBP	4.07	□□□□□ -1.76
MSI2-215	ENST00000582453	IQGAP1	P46940	1657 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ALK	Q9UM73	1620 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	NRXN3	Q9Y4C0	1643 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ADGRB1	O14514	1584 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	DLC1	Q96QB1	1528 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	RALGAPB	Q86X10	1494 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	DCC	P43146	1447 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	MET	P08581	1390 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	CCDC194	A0A1B0GVG4	234 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	DIRC3	C9JPN6	131 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	NPIPB8	E9PQR5	432 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	AKAP10	O43572	662 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	PPFIA4	O75335	1185 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	GPR32	O75388	356 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	SCAF4	O95104	1147 aa	Known RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ZNF202	O95125	648 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	GDF5	P43026	501 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	RAB27A	P51159	221 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	TBX4	P57082	545 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	LRRC41	Q15345	812 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	CSRP2	Q16527	193 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	AFMID	Q63HM1	303 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	OTUD7B	Q6GQQ9	843 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	MIGA2	Q7L4E1	593 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	DRC7	Q8IY82	874 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ZNF276	Q8N554	614 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	CPT1C	Q8TCG5	803 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	ZNF483	Q8TF39	744 aa	Predicted RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	NRG4	Q8WWG1	115 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	FAM193B	Q96PV7	902 aa	Predicted RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	CAMKK2	Q96RR4	588 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	SIN3A	Q96ST3	1273 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	SMAD5	Q99717	465 aa	Known RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	RTFDC1	Q9BY42	306 aa	Predicted RBP	4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	KRTAP4-11	Q9BYQ6	195 aa		4.06	□□□□□ -1.76
MSI2-215	ENST00000582453	CDH19	Q9H159	772 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms