RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 TSGA10IPQ3SY00 556 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CYP4A22Q5TCH4 519 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CREB3L3Q68CJ9 461 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 TPGS2Q68CL5 300 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 PDZD4Q76G19 769 aaPredicted RBP6.9□□□□□ -1.3
TVP23B-210ENST00000582288 DHX32Q7L7V1 743 aaKnown RBP6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CAMKK1Q8N5S9 505 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 ETNPPLQ8TBG4 499 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CSGALNACT1Q8TDX6 532 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 FAM20AQ96MK3 541 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 UROC1Q96N76 676 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 LRRC2Q9BYS8 371 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 SH3GLB2Q9NR46 395 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 BRPF3Q9ULD4 1205 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 CDY1Q9Y6F8 540 aa6.9□□□□□ -1.3
TVP23B-210ENST00000582288 DSPP15924 2871 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 CASTOR2A6NHX0 329 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 PRRG1O14668 218 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 PTGESO14684 152 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 TERTO14746 1132 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 TBX3O15119 743 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 RHOBTB1O94844 696 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 HMGB1P09429 215 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 YWHABP31946 246 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 CTHP32929 405 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 ARL2P36404 184 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 FOXC1Q12948 553 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 KARSQ15046 597 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 PTPAQ15257 358 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 FAM187BQ17R55 369 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 HEATR6Q6AI08 1181 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 IQCEQ6IPM2 695 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 KBTBD6Q86V97 674 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 C11orf74Q86VG3 221 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 ELMOD1Q8N336 334 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 TBCKQ8TEA7 893 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 ZCCHC14Q8WYQ9 949 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 RABGGTAQ92696 567 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 CPB2Q96IY4 423 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 CORO1BQ9BR76 489 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 EDEM2Q9BV94 578 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 RNF26Q9BY78 433 aaPredicted RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 LSG1Q9H089 658 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 ZSWIM4Q9H7M6 989 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 RYDENQ9NUL5 291 aaKnown RBP6.89□□□□□ -1.31
TVP23B-210ENST00000582288 OBP2AQ9NY56 170 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 VAV3Q9UKW4 847 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 MSRB2Q9Y3D2 182 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 RALGAPA1Q6GYQ0 2036 aa6.89□□□□□ -1.31
TVP23B-210ENST00000582288 TICRRQ7Z2Z1 1910 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 KLF18A0A0U1RQI7 1052 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 HEPACAM2A8MVW5 462 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 SPECC1L-ADORA2AF8WAN1 911 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 EML1O00423 815 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 MOSPD3O75425 235 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 B3GAT3O94766 335 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 LYPLA2O95372 231 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 NPTXRO95502 500 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 CCDC192P0DO97 292 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 WEE1P30291 646 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ADD1P35611 737 aaKnown RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 KPNA1P52294 538 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 PLCB2Q00722 1185 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ROR1Q01973 937 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 AKAP17AQ02040 695 aaKnown RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 CAPSQ13938 189 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 EPHA7Q15375 998 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ELF2Q15723 593 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 UPP1Q16831 310 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 PLK5Q496M5 336 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ARHGAP29Q52LW3 1261 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 WDR44Q5JSH3 913 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 SH3PXD2AQ5TCZ1 1133 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 GALNT17Q6IS24 598 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 Q6ZS52 159 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 HAUS6Q7Z4H7 955 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 YAF2Q8IY57 180 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 FBXL16Q8N461 479 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ZSCAN18Q8TBC5 510 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 HASPINQ8TF76 798 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 GJA10Q969M2 543 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 DDX27Q96GQ7 796 aaKnown RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ZNF512Q96ME7 567 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ZSWIM3Q96MP5 696 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 SCNM1Q9BWG6 230 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 KCNMB3Q9NPA1 279 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 PRMT7Q9NVM4 692 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 KLK14Q9P0G3 267 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 ANKFY1Q9P2R3 1169 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 WRAP73Q9P2S5 460 aaPredicted RBP6.88□□□□□ -1.31
TVP23B-210ENST00000582288 EBF1Q9UH73 591 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 TPCN1Q9ULQ1 816 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 PCDHA4Q9UN74 947 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 INSL5Q9Y5Q6 135 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 DOCK6Q96HP0 2047 aa6.88□□□□□ -1.31
TVP23B-210ENST00000582288 LNP1A1A4G5 178 aa6.87□□□□□ -1.31
TVP23B-210ENST00000582288 BCLAF3A2AJT9 711 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms