RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 PCIF1Q9H4Z3 704 aa14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 ASB7Q9H672 318 aa14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 RBAKQ9NYW8 714 aaPredicted RBP14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 CNTN3Q9P232 1028 aa14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 PCDHB12Q9Y5F1 795 aa14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 MRPL42Q9Y6G3 142 aaKnown RBP14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 ATG2AQ2TAZ0 1938 aa14.6□□□□□ -0.07
CSNK1D-220ENST00000581737 ANK1P16157 1881 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 TTC26A0AVF1 554 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 ZNF233A6NK53 670 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 CLIC2O15247 247 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 ZNF500O60304 480 aaPredicted RBP14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 EXOC3O60645 756 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 PRKCSHP14314 528 aaPredicted RBP14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 CLCN1P35523 988 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 TNFSF9P41273 254 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 CYP2J2P51589 502 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 STX17P56962 302 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 TCF15Q12870 199 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 SURF1Q15526 300 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 SLC10A6Q3KNW5 377 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 ZCWPW2Q504Y3 356 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 SEZ6Q53EL9 994 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 ZBTB41Q5SVQ8 909 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 CENPPQ6IPU0 288 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 ADGRD2Q7Z7M1 963 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 VSTM4Q8IW00 320 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 BRSK2Q8IWQ3 736 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 EDAQ92838 391 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 IQCDQ96DY2 449 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 ZNF558Q96NG5 402 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 TMEM175Q9BSA9 504 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 PLVAPQ9BX97 442 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 CLEC1BQ9P126 229 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 FAM50BQ9Y247 325 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 DERAQ9Y315 318 aa14.59□□□□□ -0.07
CSNK1D-220ENST00000581737 A0A1B0GTH6 734 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 SMIM28A0A1B0GU29 152 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 PTGESO14684 152 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 CCP110O43303 1012 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 ZC3H11AO75152 810 aaKnown RBP eCLIP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 RB1P06400 928 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 ADRB2P07550 413 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 ATP1A3P13637 1013 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 CD44P16070 742 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 NR2F2P24468 414 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 ALDH7A1P49419 539 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 ADAM15Q13444 863 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 TUSC3Q13454 348 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 SMAD4Q13485 552 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 SNRNP35Q16560 246 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 ALKAL1Q6UXT8 129 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 FILIP1Q7Z7B0 1213 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 NT5DC4Q86YG4 428 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 CSGALNACT2Q8N6G5 542 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 GSTCDQ8NEC7 633 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 MSLNLQ96KJ4 702 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 UROC1Q96N76 676 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 C11orf84Q9BUA3 381 aaPredicted RBP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 CWH43Q9H720 699 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 NRDE2Q9H7Z3 1164 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 FRMD4BQ9Y2L6 1034 aa14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.58□□□□□ -0.08
CSNK1D-220ENST00000581737 TECTAO75443 2155 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 GOLGA8IPA6NC78 632 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 TMEM221A6NGB7 291 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 GOLGA8JA6NMD2 632 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 LACTBL1A8MY62 500 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 KCNJ18B7U540 433 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 M0R296 226 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 CETN3O15182 167 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 GNA14O95837 355 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 AFF1P51825 1210 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 BCAR1P56945 870 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 DSC1Q08554 894 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 KCNJ12Q14500 433 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 TMEM132DQ14C87 1099 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 GLRA4Q5JXX5 417 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 SPECC1LQ69YQ0 1117 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 KCNT2Q6UVM3 1135 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 CRELD2Q6UXH1 353 aaPredicted RBP14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 LRRC55Q6ZSA7 311 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 TRIM67Q6ZTA4 783 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 USP37Q86T82 979 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 PPFIBP1Q86W92 1011 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 COLGALT1Q8NBJ5 622 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 PPP1R10Q96QC0 940 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 HSD3B7Q9H2F3 369 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 FAM86C1Q9NVL1 165 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 DMAC2Q9NW81 257 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 STK39Q9UEW8 545 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 CD207Q9UJ71 328 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 UBQLN1Q9UMX0 589 aaKnown RBP14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 C2CD2Q9Y426 696 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 PCDHGC5Q9Y5F6 944 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 MYO7AQ13402 2215 aa14.57□□□□□ -0.08
CSNK1D-220ENST00000581737 MAPK13O15264 365 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms