RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 LIN9Q5TKA1 542 aa21.18■□□□□ 0.98
SREBF1-220ENST00000581707 FGFBP2Q9BYJ0 223 aa21.18■□□□□ 0.98
SREBF1-220ENST00000581707 MAGEF1Q9HAY2 307 aa21.18■□□□□ 0.98
SREBF1-220ENST00000581707 WDR6Q9NNW5 1121 aaKnown RBP21.18■□□□□ 0.98
SREBF1-220ENST00000581707 LIMD1Q9UGP4 676 aa21.18■□□□□ 0.98
SREBF1-220ENST00000581707 ANK1P16157 1881 aa21.18■□□□□ 0.98
SREBF1-220ENST00000581707 H7C4K7 107 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 ASIC1P78348 528 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 POU5F1Q01860 360 aaKnown RBP21.17■□□□□ 0.98
SREBF1-220ENST00000581707 TMEM132DQ14C87 1099 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 SPATA1Q5VX52 437 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 CNNM4Q6P4Q7 775 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 APPL2Q8NEU8 664 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 BEST2Q8NFU1 509 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 C7orf25Q9BPX7 421 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 ASB7Q9H672 318 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 PCDHB8Q9UN66 801 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 DERAQ9Y315 318 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 TECTAO75443 2155 aa21.17■□□□□ 0.98
SREBF1-220ENST00000581707 CLUHO75153 1309 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 PRPF6O94906 941 aaKnown RBP21.16■□□□□ 0.98
SREBF1-220ENST00000581707 C8AP07357 584 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 NFICP08651 508 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 HNRNPA1P09651 372 aaKnown RBP eCLIP21.16■□□□□ 0.98
SREBF1-220ENST00000581707 MRPL58Q14197 206 aaKnown RBP21.16■□□□□ 0.98
SREBF1-220ENST00000581707 PPM1LQ5SGD2 360 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 SLC8B1Q6J4K2 584 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 CRELD2Q6UXH1 353 aaPredicted RBP21.16■□□□□ 0.98
SREBF1-220ENST00000581707 STXBP4Q6ZWJ1 553 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 HPS3Q969F9 1004 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 PYM1Q9BRP8 204 aaKnown RBP21.16■□□□□ 0.98
SREBF1-220ENST00000581707 TMEM206Q9H813 350 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 KCNH3Q9ULD8 1083 aa21.16■□□□□ 0.98
SREBF1-220ENST00000581707 TBC1D4O60343 1298 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 GARTP22102 1010 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 KRT85P78386 507 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 UVSSAQ2YD98 709 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 CTXN3Q4LDR2 81 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 TRIM67Q6ZTA4 783 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 RTL10Q7L3V2 364 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 SLC7A14Q8TBB6 771 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 LEO1Q8WVC0 666 aaPredicted RBP21.15■□□□□ 0.98
SREBF1-220ENST00000581707 SPATA32Q96LK8 384 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 FAM213AQ9BRX8 229 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 C2CD2Q9Y426 696 aa21.15■□□□□ 0.98
SREBF1-220ENST00000581707 DOCK6Q96HP0 2047 aa21.14■□□□□ 0.98
SREBF1-220ENST00000581707 M0QZQ0 153 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 IL18RAPO95256 599 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 LDHAP00338 332 aaKnown RBP21.14■□□□□ 0.97
SREBF1-220ENST00000581707 HOXA9P31269 272 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 AARSP49588 968 aaKnown RBP eCLIP21.14■□□□□ 0.97
SREBF1-220ENST00000581707 ARPP19P56211 112 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 ROR1Q01973 937 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 BECN1Q14457 450 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 GLIS3Q8NEA6 775 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 ZNF461Q8TAF7 563 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 SAAL1Q96ER3 474 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 CHAMP1Q96JM3 812 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 RAPGEFL1Q9UHV5 662 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 FBXL5Q9UKA1 691 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 SORCS3Q9UPU3 1222 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 ATP6V1DQ9Y5K8 247 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 TCHHQ07283 1943 aa21.14■□□□□ 0.97
SREBF1-220ENST00000581707 PPEF2O14830 753 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 XYLBO75191 536 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 ABLIM3O94929 683 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 ASGR2P07307 311 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 GBP2P32456 591 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-220ENST00000581707 LILRA4P59901 499 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 SIGLEC14Q08ET2 396 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 C9orf57Q5W0N0 161 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 ZNF280DQ6N043 979 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 DSTYKQ6XUX3 929 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 UNC13DQ70J99 1090 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 CEP57L1Q8IYX8 460 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 ZSWIM2Q8NEG5 633 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 CBWD1Q9BRT8 395 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 BLZF1Q9H2G9 400 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 POLIQ9UNA4 740 aa21.13■□□□□ 0.97
SREBF1-220ENST00000581707 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 ANO9A1A5B4 782 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 WDR27A2RRH5 827 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 TMEM221A6NGB7 291 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 M0R296 226 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 TULP1O00294 542 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 PIRO00625 290 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 EIF3DO15371 548 aaKnown RBP eCLIP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 CCL16O15467 120 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 N4BP1O75113 896 aaKnown RBP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 SLFN14P0C7P3 912 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 PAX3P23760 479 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 CMA1P23946 247 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 CASP1P29466 404 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 ELF1P32519 619 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 AFMP43652 599 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 YWHAHQ04917 246 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-220ENST00000581707 MTMR3Q13615 1198 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 FAM26FQ5R3K3 315 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 HFE2Q6ZVN8 426 aa21.12■□□□□ 0.97
SREBF1-220ENST00000581707 GRASPQ7Z6J2 395 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms