RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 CNTN3Q9P232 1028 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 DERAQ9Y315 318 aa13.16□□□□□ -0.3
CCDC84-209ENST00000580556 VPS13AQ96RL7 3174 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 SMTNL1A8MU46 457 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 CXCL8P10145 99 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 KCNE1P15382 129 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 AKAP5P24588 427 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 TNFSF9P41273 254 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 CASP4P49662 377 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 OSTNP61366 133 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 PPP2R3AQ06190 1150 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 PSMD6Q15008 389 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 PTPN21Q16825 1174 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
CCDC84-209ENST00000580556 CLLU1OSQ5K130 101 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 CEP135Q66GS9 1140 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 FRMD5Q7Z6J6 570 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 NT5DC4Q86YG4 428 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 FAM114A1Q8IWE2 563 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 FAM186BQ8IYM0 893 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 RNF169Q8NCN4 708 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 ZSWIM2Q8NEG5 633 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 SUSD6Q92537 303 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 LPPQ93052 612 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 BORCS6Q96GS4 357 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 RIPOR3Q96MK2 946 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 APOL5Q9BWW9 433 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 MRPL9Q9BYD2 267 aaKnown RBP13.15□□□□□ -0.3
CCDC84-209ENST00000580556 TMEM117Q9H0C3 514 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 RNF19AQ9NV58 838 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 PARP2Q9UGN5 583 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 C2CD2Q9Y426 696 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
CCDC84-209ENST00000580556 CACNA1AO00555 2505 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 RIF1Q5UIP0 2472 aaKnown RBP13.14□□□□□ -0.31
CCDC84-209ENST00000580556 GOLGA8IPA6NC78 632 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 ARL5CA6NH57 179 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 GOLGA8JA6NMD2 632 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 MEIS3P2A8K0S8 358 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 MEFVO15553 781 aaPredicted RBP13.14□□□□□ -0.31
CCDC84-209ENST00000580556 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
CCDC84-209ENST00000580556 OFD1O75665 1012 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 MLH1P40692 756 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 CLDN10P78369 228 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 BFSP1Q12934 665 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 NCAPHQ15003 741 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 IQCB1Q15051 598 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 SEZ6Q53EL9 994 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 CDKAL1Q5VV42 579 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 DHX40Q8IX18 779 aaKnown RBP13.14□□□□□ -0.31
CCDC84-209ENST00000580556 ABI1Q8IZP0 508 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 TMEM105Q8N8V8 129 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 GSTCDQ8NEC7 633 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 URGCPQ8TCY9 931 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 TMC2Q8TDI7 906 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 RPS6KC1Q96S38 1066 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 APOL6Q9BWW8 343 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 SRRTQ9BXP5 876 aaKnown RBP13.14□□□□□ -0.31
CCDC84-209ENST00000580556 IRF2BPLQ9H1B7 796 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 SMOC2Q9H3U7 446 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 KANSL3Q9P2N6 904 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 ARMCX3Q9UH62 379 aaPredicted RBP13.14□□□□□ -0.31
CCDC84-209ENST00000580556 CDH22Q9UJ99 828 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 FAM186AA6NE01 2351 aa13.14□□□□□ -0.31
CCDC84-209ENST00000580556 PTGESO14684 152 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 FGFR1P11362 822 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 KRT13P13646 458 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 PRKCSHP14314 528 aaPredicted RBP13.13□□□□□ -0.31
CCDC84-209ENST00000580556 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
CCDC84-209ENST00000580556 NBL1P41271 181 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 GRIK3Q13003 919 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 NOMO2Q5JPE7 1267 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 IRF2BP1Q8IU81 584 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 WDR49Q8IV35 697 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 CMTR2Q8IYT2 770 aaKnown RBP13.13□□□□□ -0.31
CCDC84-209ENST00000580556 LRRC43Q8N309 656 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 HELQQ8TDG4 1101 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 PARD3BQ8TEW8 1205 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 PPP2R3CQ969Q6 453 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 CASD1Q96PB1 797 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 PPP1R10Q96QC0 940 aaKnown RBP13.13□□□□□ -0.31
CCDC84-209ENST00000580556 GAD1Q99259 594 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 CGRRF1Q99675 332 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 TLE6Q9H808 572 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 CBX8Q9HC52 389 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 SLC38A7Q9NVC3 462 aa13.13□□□□□ -0.31
CCDC84-209ENST00000580556 SMIM28A0A1B0GU29 152 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 CARNS1A5YM72 827 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 BECN2A8MW95 431 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 LACTBL1A8MY62 500 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 XPOTO43592 962 aaKnown RBP13.12□□□□□ -0.31
CCDC84-209ENST00000580556 THP07101 528 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 ZNF18P17022 549 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 CYP3A5P20815 502 aa13.12□□□□□ -0.31
CCDC84-209ENST00000580556 IBSPP21815 317 aaPredicted RBP13.12□□□□□ -0.31
CCDC84-209ENST00000580556 ID4P47928 161 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms