RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 TRIM68Q6AZZ1 485 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 IQCEQ6IPM2 695 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 CD300LGQ6UXG3 332 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 DAGLBQ8NCG7 672 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 C3orf58Q8NDZ4 430 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 ZNF461Q8TAF7 563 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 ZNF512Q96ME7 567 aaPredicted RBP15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 NUSAP1Q9BXS6 441 aaKnown RBP15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 GOLGA2P5Q9HBQ8 144 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 RCAN3Q9UKA8 241 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 BACE2Q9Y5Z0 518 aa15.6■□□□□ 0.09
CSNK1D-213ENST00000580446 ABCA7Q8IZY2 2146 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 B3GAT3O94766 335 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 ABLIM3O94929 683 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 SFNP31947 248 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 MBTD1Q05BQ5 628 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 ELAVL2Q12926 359 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 NAB2Q15742 525 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 GLRA4Q5JXX5 417 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 ANO7Q6IWH7 933 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 CASC1Q6TDU7 716 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 FERMT3Q86UX7 667 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 TMEFF1Q8IYR6 380 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 HACE1Q8IYU2 909 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 ELMOD1Q8N336 334 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 HDDC3Q8N4P3 179 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 EXOC6Q8TAG9 804 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 RLN3Q8WXF3 142 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 SLC7A3Q8WY07 619 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 SLC5A5Q92911 643 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 CCDC51Q96ER9 411 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 BARHL2Q9NY43 387 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 WRAP73Q9P2S5 460 aaPredicted RBP15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 SLC12A7Q9Y666 1083 aa15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 URB1O60287 2271 aaKnown RBP15.59■□□□□ 0.09
CSNK1D-213ENST00000580446 DPYSL4O14531 572 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 TBX3O15119 743 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 SH3BP5O60239 455 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 TRIP6Q15654 476 aaKnown RBP15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 ITPRIPL2Q3MIP1 535 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 ARHGAP29Q52LW3 1261 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 RTL10Q7L3V2 364 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 TCEAL8Q8IYN2 117 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 ADAMTS14Q8WXS8 1223 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 EZH1Q92800 747 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 CEP170P1Q96L14 293 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 POLR3CQ9BUI4 534 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 EVLQ9UI08 416 aaPredicted RBP15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 USP20Q9Y2K6 914 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 PCNX2A6NKB5 2137 aa15.58■□□□□ 0.08
CSNK1D-213ENST00000580446 TEX15Q9BXT5 2789 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 ATG2BQ96BY7 2078 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 THP07101 528 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 CD59P13987 128 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 ATF2P15336 505 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 CLCNKBP51801 687 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 ATXN3P54252 364 aaPredicted RBP15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 PTENP60484 403 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 FUT2Q10981 343 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 PSMD2Q13200 908 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 EMC2Q15006 297 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 USP39Q53GS9 565 aaKnown RBP15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 B4GALNT3Q6L9W6 998 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 ANKS3Q6ZW76 656 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 HAUS6Q7Z4H7 955 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 DEFB119Q8N690 84 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 TSTD1Q8NFU3 115 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 ASAP3Q8TDY4 903 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 E2F7Q96AV8 911 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 EBF3Q9H4W6 596 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 CLMPQ9H6B4 373 aa15.57■□□□□ 0.08
CSNK1D-213ENST00000580446 TTLL13PA6NNM8 815 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 ZBTB39O15060 712 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 PSMD10O75832 226 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 RECQL4O94761 1208 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 AXLP30530 894 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 CIITAP33076 1130 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 ABCG1P45844 678 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 EPHA5P54756 1037 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 NCBP1Q09161 790 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 SLC8B1Q6J4K2 584 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 SLC27A1Q6PCB7 646 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 SLCO6A1Q86UG4 719 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 TMC8Q8IU68 726 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 REXO1Q8N1G1 1221 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 MINDY1Q8N5J2 469 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 RIT2Q99578 217 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 JPH2Q9BR39 696 aaPredicted RBP15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 DHX33Q9H6R0 707 aaKnown RBP15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 HPS4Q9NQG7 708 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 GKN1Q9NS71 199 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 EBF1Q9UH73 591 aa15.56■□□□□ 0.08
CSNK1D-213ENST00000580446 NUP205Q92621 2012 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 ZMYM2Q9UBW7 1377 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 A0A087WV48 116 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 UPK3BL1B0FP48 263 aa15.55■□□□□ 0.08
CSNK1D-213ENST00000580446 UPK3BL2E5RIL1 263 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms