RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ANKRD62A6NC57 917 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 HOXD10P28358 340 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CRYBB1P53674 252 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PCBP1Q15365 356 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 WHAMMP3Q1A5X7 153 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ERCC6LQ2NKX8 1250 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CCSAPQ6IQ19 270 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CXorf38Q8TB03 319 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RAET1EQ8TD07 263 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RFFLQ8WZ73 363 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CAPZA3Q96KX2 299 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PSMB7Q99436 277 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TLR10Q9BXR5 811 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NXF3Q9H4D5 531 aaKnown RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 OSGEPQ9NPF4 335 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SNX12Q9UMY4 172 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 POLIQ9UNA4 740 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF185O15231 689 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 FTLP02792 175 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CD58P19256 250 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CST5P28325 142 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ASPAP45381 313 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF710Q8N1W2 664 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NME8Q8N427 588 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TPCN2Q8NHX9 752 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PACSIN2Q9UNF0 486 aaPredicted RBP15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CNTN6Q9UQ52 1028 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PCDHB2Q9Y5E7 798 aa15.89■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GRIN2DO15399 1336 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ATMINO43313 823 aaPredicted RBP15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RTN2O75298 545 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CTSHP09668 335 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 YY1P25490 414 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF132P52740 706 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 MRPS6P82932 125 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PTPROQ16827 1216 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 FAM228AQ86W67 206 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CEP112Q8N8E3 955 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 LRRC57Q8N9N7 239 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 KIF12Q96FN5 646 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SNX27Q96L92 541 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CELF4Q9BZC1 486 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 DDX20Q9UHI6 824 aaKnown RBP15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 C2CD2Q9Y426 696 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 HYOU1Q9Y4L1 999 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CDY2AQ9Y6F7 541 aa15.88■□□□□ 0.13
CDK5RAP3-218ENST00000580391 EFCAB8A8MWE9 144 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CFHP08603 1231 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GZMAP12544 262 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 AXLP30530 894 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GNA15P30679 374 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 POLR2BP30876 1174 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RAP1GAPP47736 663 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 IFI16Q16666 785 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 UBXN11Q5T124 520 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 APBB1IPQ7Z5R6 666 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SLC35G2Q8TBE7 412 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 APOL6Q9BWW8 343 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TRIM6Q9C030 488 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CISHQ9NSE2 258 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NXF1Q9UBU9 619 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TRPV2Q9Y5S1 764 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RECQL4O94761 1208 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CXCR5P32302 372 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SSTR3P32745 418 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 DNA2P51530 1060 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 BPIFB4P59827 614 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CLEC16AQ2KHT3 1053 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 MEI1Q5TIA1 1274 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SERINC5Q86VE9 423 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 COG1Q8WTW3 980 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZMAT2Q96NC0 199 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 OSBPL9Q96SU4 736 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CHORDC1Q9UHD1 332 aaPredicted RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 COG5Q9UP83 839 aa15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 NOC2LQ9Y3T9 749 aaKnown RBP15.87■□□□□ 0.13
CDK5RAP3-218ENST00000580391 INHAP05111 366 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF394Q53GI3 561 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF667Q5HYK9 610 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 GLRA4Q5JXX5 417 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RSRC2Q7L4I2 434 aaKnown RBP15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF677Q86XU0 584 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 ZNF296Q8WUU4 475 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 TAF4BQ92750 862 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SDCBP2Q9H190 292 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 RNF19AQ9NV58 838 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 DPP3Q9NY33 737 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 M0QZ92 97 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PDE2AO00408 941 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 THAP12O43422 761 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 UNGP13051 313 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 AKAP5P24588 427 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 WDR72Q3MJ13 1102 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 SESTD1Q86VW0 696 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PASD1Q8IV76 773 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 CD302Q8IX05 232 aa15.86■□□□□ 0.13
CDK5RAP3-218ENST00000580391 PXYLP1Q8TE99 480 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms