RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 CHRNA1P02708 482 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SCP2P22307 547 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 THPOP40225 353 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 TNNT3P45378 269 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 LMAN1P49257 510 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 GUCY2FP51841 1108 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 C1QTNF8P60827 252 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 TUBB4BP68371 445 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 EFCAB13Q8IY85 973 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 FBXL13Q8NEE6 735 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 DHX38Q92620 1227 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 DEFB118Q96PH6 123 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SNX12Q9UMY4 172 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PIN4Q9Y237 131 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NOC2LQ9Y3T9 749 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CDY2AQ9Y6F7 541 aa13.63□□□□□ -0.23
CDK5RAP3-217ENST00000580287 USP8P40818 1118 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NKX3-2P78367 333 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NFX1Q12986 1120 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CCDC181Q5TID7 509 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 IRF2BP2Q7Z5L9 587 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 KREMEN1Q96MU8 473 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 LACTBL1A8MY62 500 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 AKAP5P24588 427 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CETN1Q12798 172 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SLC10A6Q3KNW5 377 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 ZACNQ401N2 412 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 C15orf39Q6ZRI6 1047 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 HDXQ7Z353 690 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 ZNF571Q7Z3V5 609 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 MS4A14Q96JA4 679 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CELF4Q9BZC1 486 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 GOLPH3Q9H4A6 298 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SNTG2Q9NY99 539 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PACSIN2Q9UNF0 486 aaPredicted RBP13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PTPN22Q9Y2R2 807 aa13.62□□□□□ -0.23
CDK5RAP3-217ENST00000580287 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PJA2O43164 708 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 FTCDO95954 541 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 HLA-DRAP01903 254 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NFICP08651 508 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CST5P28325 142 aaPredicted RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 JAM2P57087 298 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CLDN10P78369 228 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 ARHGEF6Q15052 776 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SKIDA1Q1XH10 827 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SERINC5Q86VE9 423 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 DNAJC5GQ8N7S2 189 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 EXOC4Q96A65 974 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 GLT1D1Q96MS3 346 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NXF3Q9H4D5 531 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 RPF1Q9H9Y2 349 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CASP8AP2Q9UKL3 1982 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SCN10AQ9Y5Y9 1956 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 F8VZ95 297 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 KIAA0391O15091 583 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PALMO75781 387 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 TAF2Q6P1X5 1199 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 FAM228AQ86W67 206 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 OSBPL9Q96SU4 736 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CGRRF1Q99675 332 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 RNF208Q9H0X6 261 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 AGO3Q9H9G7 860 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 APOBEC3GQ9HC16 384 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 KLK14Q9P0G3 267 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 DMGDHQ9UI17 866 aaKnown RBP13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NOD1Q9Y239 953 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 COQ4Q9Y3A0 265 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 HYOU1Q9Y4L1 999 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 THSD7BQ9C0I4 1608 aa13.61□□□□□ -0.23
CDK5RAP3-217ENST00000580287 A0A1W2PQ45 241 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 A0A1W2PQY0 241 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 EVI5O60447 810 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PIK3CAP42336 1068 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 NOP2P46087 812 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CRYBB1P53674 252 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 MCCD1P59942 119 aaPredicted RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 GLRA4Q5JXX5 417 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 JADE1Q6IE81 842 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 CREG2Q8IUH2 290 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 HNRNPLLQ8WVV9 542 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 STK33Q9BYT3 514 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 PSD3Q9NYI0 1048 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 MEIS3P2A8K0S8 358 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 MCF2P10911 925 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 MRPS6P82932 125 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 USP37Q86T82 979 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 VPS36Q86VN1 386 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 RASSF4Q9H2L5 321 aa13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SEPT11Q9NVA2 429 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP3-217ENST00000580287 SIP14410 1827 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms