RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 PAN2Q504Q3 1202 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 FAM109BQ6ICB4 259 aaPredicted RBP14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 C15orf39Q6ZRI6 1047 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 TRAPPC11Q7Z392 1133 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 SYN2Q92777 582 aaPredicted RBP14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 FAXDC2Q96IV6 333 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 GAD1Q99259 594 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 SLC38A7Q9NVC3 462 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 ITGA11Q9UKX5 1188 aa14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 UBQLN1Q9UMX0 589 aaKnown RBP14.99□□□□□ -0.01
CSNK1D-209ENST00000578904 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 A0A1W2PPC1 479 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 ARL5CA6NH57 179 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 GRXCR1A8MXD5 290 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 OFD1O75665 1012 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 HLA-DRAP01903 254 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 P4HA1P13674 534 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 TBXAS1P24557 533 aaPredicted RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 ATICP31939 592 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 KLK7P49862 253 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 RABGGTBP53611 331 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 ADKP55263 362 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 NCOA4Q13772 614 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 PTPN21Q16825 1174 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 NOMO2Q5JPE7 1267 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 SFMBT2Q5VUG0 894 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 JADE1Q6IE81 842 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 RRAGAQ7L523 313 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 TMTC1Q8IUR5 882 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 TC2NQ8N9U0 490 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 RSPH1Q8WYR4 309 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 ZNF516Q92618 1163 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 JAKMIP2Q96AA8 810 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 ZFP42Q96MM3 310 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 CASD1Q96PB1 797 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 RAD9AQ99638 391 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 BAG1Q99933 345 aaPredicted RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 MRPL9Q9BYD2 267 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 STK33Q9BYT3 514 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 TTYH3Q9C0H2 523 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 MTMR12Q9C0I1 747 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 ABHD10Q9NUJ1 306 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 CNTN3Q9P232 1028 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 INSL6Q9Y581 213 aa14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 BZW2Q9Y6E2 419 aaKnown RBP14.98□□□□□ -0.01
CSNK1D-209ENST00000578904 COL4A6Q14031 1691 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 KCNE1P15382 129 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 CYP3A5P20815 502 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 STAT1P42224 750 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 SCNN1GP51170 649 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 YWHAEP62258 255 aaKnown RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 RBP5P82980 135 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 MYO1EQ12965 1108 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 RAPGEF1Q13905 1077 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 BTG3Q14201 252 aaPredicted RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 GLRA4Q5JXX5 417 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 TDRD10Q5VZ19 366 aaKnown RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 CYP26C1Q6V0L0 522 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 CMTR2Q8IYT2 770 aaKnown RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 LRRC43Q8N309 656 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 TAS1R2Q8TE23 839 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 ZNF689Q96CS4 500 aaPredicted RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 DNAJC7Q99615 494 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 DNAI2Q9GZS0 605 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 GANQ9H2C0 597 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 RC3H2Q9HBD1 1191 aaKnown RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 UBE2TQ9NPD8 197 aaPredicted RBP14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 NLRC4Q9NPP4 1024 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 DPP3Q9NY33 737 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 DNAJC12Q9UKB3 198 aa14.97□□□□□ -0.01
CSNK1D-209ENST00000578904 INPPL1O15357 1258 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 MEFVO15553 781 aaPredicted RBP14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 NOL4O94818 638 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 IPO7O95373 1038 aaKnown RBP14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 POMCP01189 267 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 KRT19P08727 400 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 SKILP12757 684 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 FERP16591 822 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 CDK17Q00537 523 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 GCNT1Q02742 428 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 RNASELQ05823 741 aaKnown RBP14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 GRIK3Q13003 919 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 ARID5BQ14865 1188 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 RAB30Q15771 203 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 XKR4Q5GH76 650 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 LMBRD2Q68DH5 695 aaPredicted RBP14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 PDXDC1Q6P996 788 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 ALKAL1Q6UXT8 129 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 VPS36Q86VN1 386 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 EFCAB13Q8IY85 973 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 PPM1KQ8N3J5 372 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 OR5B17Q8NGF7 314 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 LMO3Q8TAP4 145 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 FAM124BQ9H5Z6 455 aaPredicted RBP14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 KANSL3Q9P2N6 904 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 PLAGL2Q9UPG8 496 aa14.96□□□□□ -0.01
CSNK1D-209ENST00000578904 PCDHA11Q9Y5I1 949 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms