RNA–Protein interactions for RNA: ENST00000578213.5

PSMD11-206, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 3

Gene PSMD11, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-206ENST00000578213 SF3B1O75533 1304 aaKnown RBP eCLIP23.98■■□□□ 1.432e-7■■■■■ 28.2
PSMD11-206ENST00000578213 MYO7AQ13402 2215 aa23.98■■□□□ 1.43
PSMD11-206ENST00000578213 NT5C1B-RDH14C9J2C7 533 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 TRAPPC3O43617 180 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 N4BP1O75113 896 aaKnown RBP23.97■■□□□ 1.43
PSMD11-206ENST00000578213 TADA2AO75478 443 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 C4BPAP04003 597 aaKnown RBP23.97■■□□□ 1.43
PSMD11-206ENST00000578213 TRIM49P0CI25 452 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 TRIM49CP0CI26 452 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 GUCY2FP51841 1108 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 NCAPHQ15003 741 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 CDKAL1Q5VV42 579 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 KRT39Q6A163 491 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 C15orf39Q6ZRI6 1047 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 DDX53Q86TM3 631 aaKnown RBP23.97■■□□□ 1.43
PSMD11-206ENST00000578213 TMEM173Q86WV6 379 aaPredicted RBP23.97■■□□□ 1.43
PSMD11-206ENST00000578213 CXorf38Q8TB03 319 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 FAM200AQ8TCP9 573 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 ARNTL2Q8WYA1 636 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 ZNF516Q92618 1163 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 LRCH3Q96II8 777 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 LMAN2LQ9H0V9 348 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 CDH23Q9H251 3354 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 TSPY26PQ9H489 355 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 CACNG4Q9UBN1 327 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 PUF60Q9UHX1 559 aaKnown RBP23.97■■□□□ 1.43
PSMD11-206ENST00000578213 NUB1Q9Y5A7 615 aa23.97■■□□□ 1.43
PSMD11-206ENST00000578213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.97■■□□□ 1.43
PSMD11-206ENST00000578213 ARHGEF37A1IGU5 675 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 BECN2A8MW95 431 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 PMM2O15305 246 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 ITGB1P05556 798 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 POLR2BP30876 1174 aaKnown RBP23.96■■□□□ 1.43
PSMD11-206ENST00000578213 AARSP49588 968 aaKnown RBP eCLIP23.96■■□□□ 1.43
PSMD11-206ENST00000578213 TAF6P49848 677 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 MXI1P50539 228 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 BIRC3Q13489 604 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 SV2CQ496J9 727 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 TDRD10Q5VZ19 366 aaKnown RBP23.96■■□□□ 1.43
PSMD11-206ENST00000578213 FUT10Q6P4F1 479 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 SV2AQ7L0J3 742 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 SPRED2Q7Z698 418 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 C3orf58Q8NDZ4 430 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 SAMSN1Q9NSI8 373 aaKnown RBP23.96■■□□□ 1.43
PSMD11-206ENST00000578213 SIX4Q9UIU6 781 aa23.96■■□□□ 1.43
PSMD11-206ENST00000578213 KCNJ18B7U540 433 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 P4HA2O15460 535 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 PHACTR2O75167 634 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 STAU1O95793 577 aaKnown RBP23.95■■□□□ 1.42
PSMD11-206ENST00000578213 EFEMP2O95967 443 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 KRT19P08727 400 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 ATICP31939 592 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 MTIF2P46199 727 aaKnown RBP23.95■■□□□ 1.42
PSMD11-206ENST00000578213 PPP3CAQ08209 521 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 MYO1EQ12965 1108 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 GPM6BQ13491 265 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 TRPC3Q13507 836 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 KCNJ12Q14500 433 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 IQCB1Q15051 598 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 DHX40Q8IX18 779 aaKnown RBP23.95■■□□□ 1.42
PSMD11-206ENST00000578213 RNF168Q8IYW5 571 aaPredicted RBP23.95■■□□□ 1.42
PSMD11-206ENST00000578213 ANKRD20A12PQ8NF67 263 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 BCL7CQ8WUZ0 217 aaPredicted RBP23.95■■□□□ 1.42
PSMD11-206ENST00000578213 TTYH1Q9H313 450 aaPredicted RBP23.95■■□□□ 1.42
PSMD11-206ENST00000578213 AGAP1Q9UPQ3 857 aa23.95■■□□□ 1.42
PSMD11-206ENST00000578213 GCLMP48507 274 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 LILRA4P59901 499 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 MAN2A1Q16706 1144 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 TCP11X2Q5H9J9 407 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 GPR65Q8IYL9 337 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 SUSD3Q96L08 255 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 HERC2P3Q9BVR0 1158 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 VRTNQ9H8Y1 702 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 CBX8Q9HC52 389 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 FANCLQ9NW38 375 aa23.94■■□□□ 1.42
PSMD11-206ENST00000578213 AFPP02771 609 aaKnown RBP23.93■■□□□ 1.42
PSMD11-206ENST00000578213 SOD2P04179 222 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 ZNF18P17022 549 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 FMO5P49326 533 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 TPM4P67936 248 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 CETN1Q12798 172 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 NCOA4Q13772 614 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 BMS1Q14692 1282 aaKnown RBP23.93■■□□□ 1.42
PSMD11-206ENST00000578213 PDE12Q6L8Q7 609 aaKnown RBP23.93■■□□□ 1.42
PSMD11-206ENST00000578213 CD300LGQ6UXG3 332 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 SPPL3Q8TCT6 385 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 RABGGTAQ92696 567 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 TAF4BQ92750 862 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 IMPG2Q9BZV3 1241 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 CERS4Q9HA82 394 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 COQ4Q9Y3A0 265 aa23.93■■□□□ 1.42
PSMD11-206ENST00000578213 F8W810 466 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 M0QZQ0 153 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 PPEF2O14830 753 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 SYN3O14994 580 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 TPM2P07951 284 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 PIK3CAP42336 1068 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 KCNH2Q12809 1159 aa23.92■■□□□ 1.42
PSMD11-206ENST00000578213 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.92■■□□□ 1.42
PSMD11-206ENST00000578213 FBXL13Q8NEE6 735 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms