RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 KIFC3Q9BVG8 833 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 RIOX1Q9H6W3 641 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 PAK5Q9P286 719 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 ZC3H7BQ9UGR2 993 aaKnown RBP10.92□□□□□ -0.66
PTPRM-205ENST00000577827 HAO1Q9UJM8 370 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 GJA3Q9Y6H8 435 aa10.92□□□□□ -0.66
PTPRM-205ENST00000577827 SYNJ2BP-COX16A0A087WUM0 186 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 M0QZ92 97 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 GPC3P51654 580 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MTHFD1LQ6UB35 978 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 NSUN6Q8TEA1 469 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 HIC2Q96JB3 615 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 OSGEPQ9NPF4 335 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 STK32BQ9NY57 414 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 COX16Q9P0S2 106 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 XPO7Q9UIA9 1087 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 PXDNQ92626 1479 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 ZC3H11AO75152 810 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 AKAP3O75969 853 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 GPSM2P81274 684 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 DSG1Q02413 1049 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 CYLC2Q14093 348 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 CCNG2Q16589 344 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 FEZF2Q8TBJ5 459 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 E2F7Q96AV8 911 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 CCDC134Q9H6E4 229 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 A1CFQ9NQ94 594 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 GABBR1Q9UBS5 961 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 PIK3R2O00459 728 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 GNGT2O14610 69 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 KLRC4O43908 158 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 CHEK2O96017 543 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MCL1Q07820 350 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 TRIP10Q15642 601 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 TTC39BQ5VTQ0 682 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 C7orf31Q8N865 590 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 POLR3FQ9H1D9 316 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 PAPOLBQ9NRJ5 636 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 KLHL8Q9P2G9 620 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 LRCH1Q9Y2L9 728 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 REXO2Q9Y3B8 237 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MYO3BQ8WXR4 1341 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 H3BRJ5 948 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 SH3BP5O60239 455 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MED24O75448 989 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 KRT4P19013 534 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 HSPA13P48723 471 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MIIPQ5JXC2 388 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 RFX8Q6ZV50 586 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 BBS5Q8N3I7 341 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 RBBP8NLQ8NC74 664 aaPredicted RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MCUQ8NE86 351 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 KIF9Q9HAQ2 790 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 XAB2Q9HCS7 855 aaKnown RBP10.91□□□□□ -0.66
PTPRM-205ENST00000577827 HEY2Q9UBP5 337 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 GRID1Q9ULK0 1009 aa10.91□□□□□ -0.66
PTPRM-205ENST00000577827 APOL1O14791 398 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 TM9SF1O15321 606 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 NDUFB10O96000 172 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 WEE2P0C1S8 567 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 GTF2H1P32780 548 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 PAPOLAP51003 745 aaKnown RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 EFNA5P52803 228 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 ITKQ08881 620 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 TAF12Q16514 161 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 C16orf89Q6UX73 402 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 THNSL1Q8IYQ7 743 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 ZNF526Q8TF50 670 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 GIPC2Q8TF65 315 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 MIEF2Q96C03 454 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 PNMA5Q96PV4 448 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 RSAD1Q9HA92 442 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 C17orf75Q9HAS0 396 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 IRAK4Q9NWZ3 460 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 CSADQ9Y600 493 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 ATMINO43313 823 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 NUDT17P0C025 328 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 EFTUD2Q15029 972 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 FAM102AQ5T9C2 384 aaPredicted RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 TRIM67Q6ZTA4 783 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 SIX6OS1Q8N1H7 587 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 MAGEC3Q8TD91 643 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 INPP5DQ92835 1189 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 APBB2Q92870 758 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 ZNF341Q9BYN7 854 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 RNF103-CHMP3A0A140T963 221 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 RCCD1A6NED2 376 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 SNX3O60493 162 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 SNUPNO95149 360 aaKnown RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 HNRNPCP07910 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 POLD1P28340 1107 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 STIP1P31948 543 aaKnown RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 HHIPL2Q6UWX4 724 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 LDHDQ86WU2 507 aa10.9□□□□□ -0.66
PTPRM-205ENST00000577827 PSPC1Q8WXF1 523 aaKnown RBP10.9□□□□□ -0.66
PTPRM-205ENST00000577827 BLOC1S4Q9NUP1 217 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms