RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 IMPACTQ9P2X3 320 aa10.9□□□□□ -0.66
CRLF3-202ENST00000577725 TNFSF13BQ9Y275 285 aa10.9□□□□□ -0.66
CRLF3-202ENST00000577725 ZNF292O60281 2723 aa10.9□□□□□ -0.66
CRLF3-202ENST00000577725 ANK1P16157 1881 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 ABHD14A-ACY1A0A1B0GW23 586 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 ZNF233A6NK53 670 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 MAPK13O15264 365 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 OGTO15294 1046 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 FAM189A1O60320 539 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 EFCAB14O75071 495 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 LMNAP02545 664 aaKnown RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 DLATP10515 647 aaKnown RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 SLC9A1P19634 815 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 CASP14P31944 242 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 THPOP40225 353 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 CRYBB1P53674 252 aaPredicted RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 PPP2R3AQ06190 1150 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 MGAT3Q09327 533 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 HYAL1Q12794 435 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 TRIM71Q2Q1W2 868 aaKnown RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 FAM117BQ6P1L5 589 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 TAF2Q6P1X5 1199 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 FAM228AQ86W67 206 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 TMEM130Q8N3G9 435 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 TC2NQ8N9U0 490 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 CCDC150Q8NCX0 1101 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 TMEM174Q8WUU8 243 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 ELMO3Q96BJ8 720 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 CELF4Q9BZC1 486 aaKnown RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 PDE11AQ9HCR9 933 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 RBAKQ9NYW8 714 aaPredicted RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 AJAP1Q9UKB5 411 aaPredicted RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 PYCARDQ9ULZ3 195 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
CRLF3-202ENST00000577725 NOC2LQ9Y3T9 749 aaKnown RBP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.89□□□□□ -0.67
CRLF3-202ENST00000577725 PTPRJQ12913 1337 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 TTC26A0AVF1 554 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 AKR1B15C9JRZ8 316 aaPredicted RBP10.88□□□□□ -0.67
CRLF3-202ENST00000577725 M0QZ92 97 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 ABCB7O75027 752 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 MFAP3LO75121 409 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 LRRN2O75325 713 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 NOL4O94818 638 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 CHRNA1P02708 482 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 SFPQP23246 707 aaKnown RBP eCLIP10.88□□□□□ -0.67
CRLF3-202ENST00000577725 GSDMDP57764 484 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 PTK7Q13308 1070 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 PSMD6Q15008 389 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 DPY19L2P1Q6NXN4 242 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 GJB7Q6PEY0 223 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 GBP6Q6ZN66 633 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 RSPH3Q86UC2 560 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 BRSK2Q8IWQ3 736 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 NME8Q8N427 588 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 NEK11Q8NG66 645 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
CRLF3-202ENST00000577725 TMC2Q8TDI7 906 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 PRIMPOLQ96LW4 560 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 EIF2AQ9BY44 585 aaKnown RBP10.88□□□□□ -0.67
CRLF3-202ENST00000577725 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 INTS2Q9H0H0 1204 aaKnown RBP10.88□□□□□ -0.67
CRLF3-202ENST00000577725 GANQ9H2C0 597 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 KIAA1586Q9HCI6 787 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 WDR70Q9NW82 654 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 PIN4Q9Y237 131 aaKnown RBP10.88□□□□□ -0.67
CRLF3-202ENST00000577725 PCDHGC5Q9Y5F6 944 aa10.88□□□□□ -0.67
CRLF3-202ENST00000577725 SCN5AQ14524 2016 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 TRIP11Q15643 1979 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 KIAA0391O15091 583 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 MEFVO15553 781 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 LDHAP00338 332 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 STAG3L1P0CL83 205 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CXCL8P10145 99 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 MCF2P10911 925 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 GHRP10912 638 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 HOXB3P14651 431 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 TRIM21P19474 475 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 IBSPP21815 317 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 EIF4BP23588 611 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 PON1P27169 355 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 HOXA11P31270 313 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 MXI1P50539 228 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CCZ1BP86790 482 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 CDC42EP1Q00587 391 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 PTPN11Q06124 597 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 ENOX2Q16206 610 aaKnown RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 EXOC3L4Q17RC7 722 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 RSPO4Q2I0M5 234 aaPredicted RBP10.87□□□□□ -0.67
CRLF3-202ENST00000577725 ZNF618Q5T7W0 954 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 KIAA0319Q5VV43 1072 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 SCARA3Q6AZY7 606 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 LRRC8AQ8IWT6 810 aa10.87□□□□□ -0.67
CRLF3-202ENST00000577725 C17orf53Q8N3J3 647 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms