RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 RASA4BC9J798 803 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 RASA4O43374 803 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 CD58P19256 250 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 KLRC2P26717 231 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 CHRNA5P30532 468 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 SSTR3P32745 418 aaPredicted RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 GJC1P36383 396 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 MAGEA4P43358 317 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 STRN3Q13033 797 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 TMED2Q15363 201 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 RNF43Q68DV7 783 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 FAM47EQ6ZV65 393 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 RELL1Q8IUW5 271 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 DHX37Q8IY37 1157 aaKnown RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 MIEF2Q96C03 454 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 RBM15Q96T37 977 aaKnown RBP eCLIP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 NTPCRQ9BSD7 190 aaKnown RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
SCARF1-206ENST00000573852 DONSONQ9NYP3 566 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 KLHL14Q9P2G3 628 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 SUFUQ9UMX1 484 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 C15orf41Q9Y2V0 281 aa20.25■□□□□ 0.83
SCARF1-206ENST00000573852 WDR64B1ANS9 1081 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 H0YIN7 160 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 DSG3P32926 999 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 PGM5Q15124 567 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 C15orf39Q6ZRI6 1047 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 USP37Q86T82 979 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 MCF2L2Q86YR7 1114 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 PASD1Q8IV76 773 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 RHOT1Q8IXI2 618 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 TRIM11Q96F44 468 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 IFT74Q96LB3 600 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 CCDC77Q9BR77 488 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 C11orf70Q9BRQ4 267 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 ACTL7BQ9Y614 415 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 GSTTP1A0A1W2PQM5 241 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 HNRNPDLO14979 420 aaKnown RBP20.24■□□□□ 0.83
SCARF1-206ENST00000573852 MSH2P43246 934 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 P3H1Q32P28 736 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 SPOPLQ6IQ16 392 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 PPP1R21Q6ZMI0 780 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 PITPNM3Q9BZ71 974 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 TCEAL9Q9UHQ7 104 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 USTQ9Y2C2 406 aa20.24■□□□□ 0.83
SCARF1-206ENST00000573852 PSTPIP1O43586 416 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 GCAP28676 217 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 JAK3P52333 1124 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 RPS6P62753 249 aaKnown RBP20.23■□□□□ 0.83
SCARF1-206ENST00000573852 STYK1Q6J9G0 422 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 ZNF677Q86XU0 584 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 KATNAL2Q8IYT4 538 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 GLIS1Q8NBF1 620 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 BBOF1Q8ND07 529 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 SPIRE2Q8WWL2 714 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 PAIP2Q9BPZ3 127 aaKnown RBP20.23■□□□□ 0.83
SCARF1-206ENST00000573852 ZC3H11AO75152 810 aaKnown RBP eCLIP20.23■□□□□ 0.83
SCARF1-206ENST00000573852 SPAG7O75391 227 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 CCNB1P14635 433 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 WNT7BP56706 349 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 GHRHRQ02643 423 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 MIS18BP1Q6P0N0 1132 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 GSTA5Q7RTV2 222 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 ANKRD35Q8N283 1001 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 ZCCHC9Q8N567 271 aaKnown RBP20.23■□□□□ 0.83
SCARF1-206ENST00000573852 ZNF341Q9BYN7 854 aa20.23■□□□□ 0.83
SCARF1-206ENST00000573852 FAM47DPA6NHR8 397 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 CHRM1P11229 460 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-206ENST00000573852 SSR1P43307 286 aaKnown RBP20.22■□□□□ 0.83
SCARF1-206ENST00000573852 MAMLD1Q13495 774 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 DLGAP5Q15398 846 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 OGFOD1Q8N543 542 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 KLHL11Q9NVR0 708 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 NOP53Q9NZM5 478 aaKnown RBP20.22■□□□□ 0.83
SCARF1-206ENST00000573852 CCND1P24385 295 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 DGKZQ13574 1117 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 ACVR2BQ13705 512 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 ATP13A4Q4VNC1 1196 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 AKT1S1Q96B36 256 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 CEP170P1Q96L14 293 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 FHDC1Q9C0D6 1143 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-206ENST00000573852 SAYSD1Q9NPB0 183 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 ADAM22Q9P0K1 906 aa20.22■□□□□ 0.83
SCARF1-206ENST00000573852 TESPA1A2RU30 521 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 ZNF862O60290 1169 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 ECM2O94769 699 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 ASMTLO95671 621 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 SFNP31947 248 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 IL9RQ01113 521 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 AEBP2Q6ZN18 517 aaPredicted RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 TRABD2AQ86V40 505 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 SAMD3Q8N6K7 520 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 SPOCK2Q92563 424 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 RSRC1Q96IZ7 334 aaKnown RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.21■□□□□ 0.83
SCARF1-206ENST00000573852 A0A1B0GUA9 196 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 PI4K2BG5E9Z4 385 aa20.21■□□□□ 0.83
SCARF1-206ENST00000573852 HLA-DRAP01903 254 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms