RNA–Protein interactions for RNA: ENST00000572270.1

CCDC40-208, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 460 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-208ENST00000572270 SEC24AO95486 1093 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 APBB3O95704 486 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 CAPNS1P04632 268 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 YWHABP31946 246 aaKnown RBP14.41□□□□□ -0.1
CCDC40-208ENST00000572270 IRX4P78413 519 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 PLCB2Q00722 1185 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 CAPSQ13938 189 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 NAB2Q15742 525 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 TMEM132AQ24JP5 1023 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 TPGS2Q68CL5 300 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 PMS2CLQ68D20 193 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 CHCHD4Q8N4Q1 142 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 SHKBP1Q8TBC3 707 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 TBCKQ8TEA7 893 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 HNRNPLLQ8WVV9 542 aaKnown RBP14.41□□□□□ -0.1
CCDC40-208ENST00000572270 LRIG1Q96JA1 1093 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 NUSAP1Q9BXS6 441 aaKnown RBP14.41□□□□□ -0.1
CCDC40-208ENST00000572270 NFKBIZQ9BYH8 718 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 CCDC86Q9H6F5 360 aaKnown RBP14.41□□□□□ -0.1
CCDC40-208ENST00000572270 CEP72Q9P209 647 aa14.41□□□□□ -0.1
CCDC40-208ENST00000572270 NAP1L2Q9ULW6 460 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-208ENST00000572270 NUP210Q8TEM1 1887 aaPredicted RBP14.41□□□□□ -0.1
CCDC40-208ENST00000572270 THADAQ6YHU6 1953 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 ASCC3Q8N3C0 2202 aaKnown RBP14.4□□□□□ -0.1
CCDC40-208ENST00000572270 A0A1W2PRU2 124 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 H7C4K7 107 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 I3L4J1 428 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 EDIL3O43854 480 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 RNF40O75150 1001 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 TDP2O95551 362 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 GSPT1P15170 499 aaKnown RBP14.4□□□□□ -0.1
CCDC40-208ENST00000572270 CDC27P30260 824 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 MAPK8P45983 427 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 CLCNKBP51801 687 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 ITPRIPL2Q3MIP1 535 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 TTC22Q5TAA0 569 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 ARID3BQ8IVW6 561 aaPredicted RBP14.4□□□□□ -0.1
CCDC40-208ENST00000572270 C4orf19Q8IY42 314 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 ETNPPLQ8TBG4 499 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 UROC1Q96N76 676 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 C22orf23Q9BZE7 217 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 CACNA2D2Q9NY47 1150 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 BPTFQ12830 3046 aa14.4□□□□□ -0.1
CCDC40-208ENST00000572270 ATG2BQ96BY7 2078 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 KLF18A0A0U1RQI7 1052 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 CCDC196A0A1B0GTZ2 297 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 CCDC194A0A1B0GVG4 234 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 EML1O00423 815 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 SLC27A2O14975 620 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 N4BP3O15049 544 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 TBX3O15119 743 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 BRCC3P46736 316 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 DGKEP52429 567 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 AKAP17AQ02040 695 aaKnown RBP14.39□□□□□ -0.11
CCDC40-208ENST00000572270 TNK2Q07912 1038 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 ZNF423Q2M1K9 1284 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 USP39Q53GS9 565 aaKnown RBP14.39□□□□□ -0.11
CCDC40-208ENST00000572270 TMEM196Q5HYL7 178 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 GPIHBP1Q8IV16 184 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 LXNQ9BS40 222 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 OBP2AQ9NY56 170 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 WRAP73Q9P2S5 460 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-208ENST00000572270 EBF1Q9UH73 591 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 EVLQ9UI08 416 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-208ENST00000572270 BRPF3Q9ULD4 1205 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 TPCN1Q9ULQ1 816 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 MAFFQ9ULX9 164 aa14.39□□□□□ -0.11
CCDC40-208ENST00000572270 CYP3A7-CYP3A51PA0A087WV96 503 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-208ENST00000572270 CYP3A7P24462 503 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 DHPSP49366 369 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-208ENST00000572270 PPP2R5CQ13362 524 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 UPP1Q16831 310 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 TRIM61Q5EBN2 209 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 PPP4R3AQ6IN85 833 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 FSTL4Q6MZW2 842 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 HDDC3Q8N4P3 179 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 BPIFB1Q8TDL5 484 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 PIGKQ92643 395 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 PRIMPOLQ96LW4 560 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 SCUBE2Q9NQ36 999 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 XPNPEP1Q9NQW7 623 aa14.38□□□□□ -0.11
CCDC40-208ENST00000572270 PRMT7Q9NVM4 692 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-208ENST00000572270 POLR3BQ9NW08 1133 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-208ENST00000572270 THG1LQ9NWX6 298 aaKnown RBP14.38□□□□□ -0.11
CCDC40-208ENST00000572270 AFF4Q9UHB7 1163 aaKnown RBP14.38□□□□□ -0.11
CCDC40-208ENST00000572270 PCNX2A6NKB5 2137 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 SYN3O14994 580 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 CPB1P15086 417 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 IGFBP6P24592 240 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-208ENST00000572270 ADD1P35611 737 aaKnown RBP14.37□□□□□ -0.11
CCDC40-208ENST00000572270 RCAN1P53805 252 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 ATXN3P54252 364 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-208ENST00000572270 AMPD2Q01433 879 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 PLD1Q13393 1074 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 CTXN3Q4LDR2 81 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 ARHGAP15Q53QZ3 475 aa14.37□□□□□ -0.11
CCDC40-208ENST00000572270 GLRA4Q5JXX5 417 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms