RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 KCNH3Q9ULD8 1083 aa18.87■□□□□ 0.61
LITAF-211ENST00000572255 PCDHB8Q9UN66 801 aa18.87■□□□□ 0.61
LITAF-211ENST00000572255 A0A0B4J269 797 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 ARHGEF37A1IGU5 675 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 LACTBL1A8MY62 500 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 LRG1P02750 347 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 ATF2P15336 505 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 NMT1P30419 496 aaKnown RBP18.86■□□□□ 0.61
LITAF-211ENST00000572255 LRPAP1P30533 357 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 DDIT3P35638 169 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 GTF2BQ00403 316 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 ZNF280DQ6N043 979 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 FAM173BQ6P4H8 233 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 SLC39A4Q6P5W5 647 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 MTSS1LQ765P7 747 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 MAP4K3Q8IVH8 894 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 NPAS3Q8IXF0 933 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 DDX12PQ92771 950 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 RTP3Q9BQQ7 232 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 MSTO1Q9BUK6 570 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 RPP25Q9BUL9 199 aaKnown RBP18.86■□□□□ 0.61
LITAF-211ENST00000572255 RPF1Q9H9Y2 349 aaKnown RBP18.86■□□□□ 0.61
LITAF-211ENST00000572255 SLC2A4RGQ9NR83 387 aa18.86■□□□□ 0.61
LITAF-211ENST00000572255 UBQLN1Q9UMX0 589 aaKnown RBP18.86■□□□□ 0.61
LITAF-211ENST00000572255 SRPRBQ9Y5M8 271 aaKnown RBP18.86■□□□□ 0.61
LITAF-211ENST00000572255 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.86■□□□□ 0.61
LITAF-211ENST00000572255 STK25O00506 426 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 CYP3A5P20815 502 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 ABCD1P33897 745 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 TPGS2Q68CL5 300 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 TCEAL8Q8IYN2 117 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 KRI1Q8N9T8 703 aaKnown RBP18.85■□□□□ 0.61
LITAF-211ENST00000572255 ING5Q8WYH8 240 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 INTS4Q96HW7 963 aaKnown RBP18.85■□□□□ 0.61
LITAF-211ENST00000572255 BACH2Q9BYV9 841 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 CYP4F11Q9HBI6 524 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 CCDC39Q9UFE4 941 aa18.85■□□□□ 0.61
LITAF-211ENST00000572255 MRPS23Q9Y3D9 190 aaKnown RBP18.85■□□□□ 0.61
LITAF-211ENST00000572255 USP34Q70CQ2 3546 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 M0QZQ0 153 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 XPOTO43592 962 aaKnown RBP18.84■□□□□ 0.61
LITAF-211ENST00000572255 SEC24AO95486 1093 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 ADRB2P07550 413 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 RHOP08100 348 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 PTPN2P17706 415 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 RFX1P22670 979 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 GUCY2FP51841 1108 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 CEBPZQ03701 1054 aaKnown RBP18.84■□□□□ 0.61
LITAF-211ENST00000572255 ZC2HC1CQ53FD0 456 aaPredicted RBP18.84■□□□□ 0.61
LITAF-211ENST00000572255 CCDC105Q8IYK2 499 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 CLIC6Q96NY7 704 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 TSPAN18Q96SJ8 248 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 ST6GALNAC4Q9H4F1 302 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 TBC1D17Q9HA65 648 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 AVENQ9NQS1 362 aaPredicted RBP18.84■□□□□ 0.61
LITAF-211ENST00000572255 ARHGEF3Q9NR81 526 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 CPSF3Q9UKF6 684 aaKnown RBP18.84■□□□□ 0.61
LITAF-211ENST00000572255 INSL5Q9Y5Q6 135 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 ANK1P16157 1881 aa18.84■□□□□ 0.61
LITAF-211ENST00000572255 ANKRD63C9JTQ0 380 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 TXLNAP40222 546 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 AARSP49588 968 aaKnown RBP eCLIP18.83■□□□□ 0.6
LITAF-211ENST00000572255 SLC5A9Q2M3M2 681 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 RRAGBQ5VZM2 374 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 DYMQ7RTS9 669 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 SFR1Q86XK3 245 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 FAM212AQ96EL1 285 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 FOXD4L1Q9NU39 408 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 AFF4Q9UHB7 1163 aaKnown RBP18.83■□□□□ 0.6
LITAF-211ENST00000572255 MTMR6Q9Y217 621 aa18.83■□□□□ 0.6
LITAF-211ENST00000572255 TIMM13Q9Y5L4 95 aaPredicted RBP18.83■□□□□ 0.6
LITAF-211ENST00000572255 TISP43B9A030 160 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 CPB1P15086 417 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 CEBPBP17676 345 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 GPC5P78333 572 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 YWHAHQ04917 246 aaPredicted RBP18.82■□□□□ 0.6
LITAF-211ENST00000572255 ADCY1Q08828 1119 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 SPATA1Q5VX52 437 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 JADE1Q6IE81 842 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 PHLDB3Q6NSJ2 640 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 CD302Q8IX05 232 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 DTWD2Q8NBA8 298 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 BEST2Q8NFU1 509 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 MCRS1Q96EZ8 462 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 KXD1Q9BQD3 176 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 CORO1BQ9BR76 489 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 GDE1Q9NZC3 331 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 MAFFQ9ULX9 164 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 VPS13AQ96RL7 3174 aa18.82■□□□□ 0.6
LITAF-211ENST00000572255 K7ELQ4 463 aaPredicted RBP18.81■□□□□ 0.6
LITAF-211ENST00000572255 PPEF2O14830 753 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 GFRA3O60609 400 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 OAZ2O95190 189 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 NFICP08651 508 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 ACOT2P49753 483 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 TMEM132DQ14C87 1099 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 ADALQ6DHV7 355 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 SLFN12LQ6IEE8 588 aa18.81■□□□□ 0.6
LITAF-211ENST00000572255 DSTYKQ6XUX3 929 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms