RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 FBXL13Q8NEE6 735 aa10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 MRFAP1L1Q96HT8 127 aa10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 TSPAN18Q96SJ8 248 aa10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 PI4K2AQ9BTU6 479 aa10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 APOBEC3GQ9HC16 384 aaKnown RBP10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.733e-13■■■■■ 279.4
TOM1L1-210ENST00000572158 DNAJB4Q9UDY4 337 aa10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 AJAP1Q9UKB5 411 aaPredicted RBP10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 LRFN2Q9ULH4 789 aa10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 UBQLN1Q9UMX0 589 aaKnown RBP10.51□□□□□ -0.73
TOM1L1-210ENST00000572158 A0A1W2PQC6 194 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 TBKBP1A7MCY6 615 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 SPTLC1O15269 473 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 TNNC2P02585 160 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 LINC00271P0C7V0 271 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 LRPAP1P30533 357 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 POLR2BP30876 1174 aaKnown RBP10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 CLCNKBP51801 687 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 HTRA4P83105 476 aaPredicted RBP10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 GRIK3Q13003 919 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 BIRC3Q13489 604 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 NCOA4Q13772 614 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 FILIP1LQ4L180 1135 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 C9orf57Q5W0N0 161 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 FAM109BQ6ICB4 259 aaPredicted RBP10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 SPOPLQ6IQ16 392 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 PHLDB3Q6NSJ2 640 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 GJB7Q6PEY0 223 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 TRIM65Q6PJ69 517 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 VSTM4Q8IW00 320 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 COLGALT2Q8IYK4 626 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 C3orf58Q8NDZ4 430 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 CACTINQ8WUQ7 758 aaKnown RBP10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 TATDN2Q93075 761 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 ANKRD36BP1Q96IX9 119 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 RPS6KC1Q96S38 1066 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 INTS2Q9H0H0 1204 aaKnown RBP10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 CWH43Q9H720 699 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 NRDE2Q9H7Z3 1164 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 RAB20Q9NX57 234 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 GCNT4Q9P109 453 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 ITGA11Q9UKX5 1188 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 PCDHB8Q9UN66 801 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 AGAP1Q9UPQ3 857 aa10.5□□□□□ -0.73
TOM1L1-210ENST00000572158 CASTOR2A6NHX0 329 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 GJB5O95377 273 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 ASS1P00966 412 aaKnown RBP10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 ITGB1P05556 798 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 CHRM1P11229 460 aaPredicted RBP10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 KCNJ6P48051 423 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 LRMPQ12912 555 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 TUSC3Q13454 348 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 UPP1Q16831 310 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 EXOC3L4Q17RC7 722 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 PAN2Q504Q3 1202 aaKnown RBP10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 FKBP15Q5T1M5 1219 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 GBP6Q6ZN66 633 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 HERC6Q8IVU3 1022 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 ARHGEF19Q8IW93 802 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 BEST2Q8NFU1 509 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 KAT5Q92993 513 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 TTYH3Q9C0H2 523 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 GANQ9H2C0 597 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 SLC4A7Q9Y6M7 1214 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
TOM1L1-210ENST00000572158 GRXCR1A8MXD5 290 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 HOXA2O43364 376 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 CBFA2T2O43439 604 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 N4BP1O75113 896 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 PHACTR2O75167 634 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 TPM2P07951 284 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 KRT19P08727 400 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 PBX3P40426 434 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 PIK3CAP42336 1068 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 RBP5P82980 135 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 TBX2Q13207 712 aaPredicted RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 KLHDC7AQ5VTJ3 777 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 ARID3AQ99856 593 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 LSM14BQ9BX40 385 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 NAA15Q9BXJ9 866 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 PLCB1Q9NQ66 1216 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 FAM207AQ9NSI2 230 aaPredicted RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 SLC38A7Q9NVC3 462 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 KANSL3Q9P2N6 904 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 LCHNA4D1U4 455 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 PODXLO00592 558 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 ARHGEF15O94989 841 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 STAU1O95793 577 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 ATP2A2P16615 1042 aaKnown RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 SLC11A1P49279 550 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 LILRA4P59901 499 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 SGSM1Q2NKQ1 1148 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 RRAGAQ7L523 313 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 LIMS2Q7Z4I7 341 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 TMEM173Q86WV6 379 aaPredicted RBP10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 ABI1Q8IZP0 508 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 PHOSPHO2Q8TCD6 241 aa10.48□□□□□ -0.73
TOM1L1-210ENST00000572158 URGCPQ8TCY9 931 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms