RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CLIC2O15247 247 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 SPTLC1O15269 473 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 CYP3A5P20815 502 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 GARTP22102 1010 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 MCM4P33991 863 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 SYKP43405 635 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 NUCB2P80303 420 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 ITIH3Q06033 890 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 STK4Q13043 487 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 ALCAMQ13740 583 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 TMEM132DQ14C87 1099 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 VARS2Q5ST30 1063 aaKnown RBP11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 C9orf57Q5W0N0 161 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 CES5AQ6NT32 575 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 GPR149Q86SP6 731 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 RNF135Q8IUD6 432 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 KIAA0895Q8NCT3 520 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 KREMEN2Q8NCW0 462 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 ZNF707Q96C28 371 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 SUSD3Q96L08 255 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 ASB7Q9H672 318 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 SFXN1Q9H9B4 322 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 DZANK1Q9NVP4 752 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 NUB1Q9Y5A7 615 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 CDY1Q9Y6F8 540 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 NOTCH4Q99466 2003 aa11.11□□□□□ -0.63
GTF3C1-213ENST00000571886 ANO9A1A5B4 782 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 C2CD4DB7Z1M9 353 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 PI4K2BG5E9Z4 385 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 PIRO00625 290 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 EIF3DO15371 548 aaKnown RBP eCLIP11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 TRAPPC3O43617 180 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 EXTL3O43909 919 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 ZNF202O95125 648 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 AARSP49588 968 aaKnown RBP eCLIP11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 RAB33AQ14088 237 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 ATAT1Q5SQI0 421 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 ARMCX5Q6P1M9 558 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 BRSK2Q8IWQ3 736 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 CD302Q8IX05 232 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 BEST2Q8NFU1 509 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 BORCS6Q96GS4 357 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 PDE11AQ9HCR9 933 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 DPP3Q9NY33 737 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 FBXL5Q9UKA1 691 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 FBXW11Q9UKB1 542 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 BACE2Q9Y5Z0 518 aa11.1□□□□□ -0.63
GTF3C1-213ENST00000571886 DOCK8Q8NF50 2099 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 WDR27A2RRH5 827 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 M0QZQ0 153 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 SYN3O14994 580 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 N4BP1O75113 896 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 ZMYND10O75800 440 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 PAPLNO95428 1278 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 MTHFRP42898 656 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 ARPP19P56211 112 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 LILRA4P59901 499 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 POU5F1Q01860 360 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 DPYDQ12882 1025 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 LMBRD2Q68DH5 695 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 KRBA2Q6ZNG9 492 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 ANKS3Q6ZW76 656 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 CMASQ8NFW8 434 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 CXorf38Q8TB03 319 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 TMEM209Q96SK2 561 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 PYM1Q9BRP8 204 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 PLEKHA4Q9H4M7 779 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 C11orf16Q9NQ32 467 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 TSHZ2Q9NRE2 1034 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 RBAKQ9NYW8 714 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 HSPBP1Q9NZL4 362 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 USP25Q9UHP3 1055 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 PCDHB8Q9UN66 801 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 DERAQ9Y315 318 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 C2CD2Q9Y426 696 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 PTPRJQ12913 1337 aa11.09□□□□□ -0.63
GTF3C1-213ENST00000571886 TSC2P49815 1807 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 FAM86C2PA6NEL3 165 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 CCL16O15467 120 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 XPOTO43592 962 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 ABLIM3O94929 683 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 IL18RAPO95256 599 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 SEC24AO95486 1093 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 VNN2O95498 520 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 LDHAP00338 332 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 C1RP00736 705 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 RPN1P04843 607 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 C8AP07357 584 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 OR4Q2P0C623 313 aa11.08□□□□□ -0.64
GTF3C1-213ENST00000571886 CDR1P51861 262 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms