RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 NID2Q14112 1375 aa11.75□□□□□ -0.53
PCDHGA4-201ENST00000571252 BAZ2AQ9UIF9 1905 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 GLI3P10071 1580 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 NVLO15381 856 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 IRX1P78414 480 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 CENPCQ03188 943 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 VPS72Q15906 364 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 HHIPL2Q6UWX4 724 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 GJD4Q96KN9 370 aaPredicted RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 SERPINI1Q99574 410 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 WWP1Q9H0M0 922 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 RANBP17Q9H2T7 1088 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 MAPK6Q16659 721 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 ACAD10Q6JQN1 1059 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 CCDC124Q96CT7 223 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 PGM2Q96G03 612 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 LRGUKQ96M69 825 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 RIT2Q99578 217 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 CBWD1Q9BRT8 395 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 TIPINQ9BVW5 301 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 CYP26B1Q9NR63 512 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 RNF146Q9NTX7 359 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 THEGQ9P2T0 379 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 CNOT7Q9UIV1 285 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 RPL21P46778 160 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 BCAR1P56945 870 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 EIF3EP60228 445 aaKnown RBP11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 ART3Q13508 389 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 TRADDQ15628 312 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 RGS9BPQ6ZS82 235 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 C3orf62Q6ZUJ4 267 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZNF720Q7Z2F6 126 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 TATDN2Q93075 761 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 CYP4F11Q9HBI6 524 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 OLFML3Q9NRN5 406 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 WHRNQ9P202 907 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 HSPA4LO95757 839 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 SREBF1P36956 1147 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 C2CD6Q53TS8 623 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 PLA2G4FQ68DD2 849 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 SESTD1Q86VW0 696 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 MED10Q9BTT4 135 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 PHTF1Q9UMS5 762 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
PCDHGA4-201ENST00000571252 RIPK2O43353 540 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 TTC4O95801 387 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 ENO1P06733 434 aaKnown RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 GSTA2P09210 222 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 CDH6P55285 790 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 ROR1Q01973 937 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SLC30A9Q6PML9 568 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SLC26A7Q8TE54 656 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 FAM193BQ96PV7 902 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SH3GL2Q99962 352 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SH3GL3Q99963 347 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 PPCSQ9HAB8 311 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 HAO1Q9UJM8 370 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 O00370 1275 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 KRT3P12035 628 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 OSBPP22059 807 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 MRPS35P82673 323 aaKnown RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 IFRD2Q12894 506 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SYCP2LQ5T4T6 812 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 AMIGO3Q86WK7 504 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 DNAJC19Q96DA6 116 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 FGD4Q96M96 766 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 MMTAG2Q9BU76 263 aaKnown RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 VPS11Q9H270 941 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 HLA-DRAP01903 254 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 PRKCIP41743 596 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 COG2Q14746 738 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 RABGAP1LQ5R372 815 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SPOPLQ6IQ16 392 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 TMEM154Q6P9G4 183 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 CBWD2Q8IUF1 395 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 FAM53CQ9NYF3 392 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 AKT3Q9Y243 479 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 MYH3P11055 1940 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 TOGARAM1Q9Y4F4 1720 aa11.73□□□□□ -0.53
PCDHGA4-201ENST00000571252 SRRM3A6NNA2 597 aaPredicted RBP11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 AGPSO00116 658 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 FANCGO15287 622 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 PPFIA2O75334 1257 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 CYP11B1P15538 503 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 TAP1Q03518 808 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 NFIAQ12857 509 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 KRT80Q6KB66 452 aa11.72□□□□□ -0.53
PCDHGA4-201ENST00000571252 MAGEB18Q96M61 343 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms