RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 PDE6CP51160 858 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 ATF7IP2Q5U623 682 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 LMBRD2Q68DH5 695 aaPredicted RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 RUFY4Q6ZNE9 571 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 RPAINQ86UA6 219 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 DNAAF5Q86Y56 855 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 RHOT2Q8IXI1 618 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 NME8Q8N427 588 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.59■□□□□ 0.575e-6■■■■□ 23.1
RPAIN-208ENST00000571043 PTPRJQ12913 1337 aa18.58■□□□□ 0.57
RPAIN-208ENST00000571043 TMCO5BA8MYB1 307 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 INO80B-WBP1J3KQ70 363 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 HADHBP55084 474 aaKnown RBP18.58■□□□□ 0.56
RPAIN-208ENST00000571043 BPIFB4P59827 614 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 CDC42EP1Q00587 391 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 CDR2Q01850 454 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 SNX17Q15036 470 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 RPS6KA1Q15418 735 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 CFAP221Q4G0U5 840 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 CCDC181Q5TID7 509 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 NECAB2Q7Z6G3 386 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 ZBTB33Q86T24 672 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 SLC47A2Q86VL8 602 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 PALB2Q86YC2 1186 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 MMGT1Q8N4V1 131 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 TAF4BQ92750 862 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 PI4K2AQ9BTU6 479 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 CCDC94Q9BW85 323 aaPredicted RBP18.58■□□□□ 0.56
RPAIN-208ENST00000571043 INO80BQ9C086 356 aaPredicted RBP18.58■□□□□ 0.56
RPAIN-208ENST00000571043 C11orf49Q9H6J7 331 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 TRMT13Q9NUP7 481 aaKnown RBP18.58■□□□□ 0.56
RPAIN-208ENST00000571043 TAS2R14Q9NYV8 317 aa18.58■□□□□ 0.56
RPAIN-208ENST00000571043 TARSL2A2RTX5 802 aaKnown RBP18.57■□□□□ 0.56
RPAIN-208ENST00000571043 ATP8B1O43520 1251 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 B4GALT4O60513 344 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 KIF4AO95239 1232 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 FTLP02792 175 aaPredicted RBP18.57■□□□□ 0.56
RPAIN-208ENST00000571043 RPLP2P05387 115 aaKnown RBP18.57■□□□□ 0.56
RPAIN-208ENST00000571043 TBXAS1P24557 533 aaPredicted RBP18.57■□□□□ 0.56
RPAIN-208ENST00000571043 FMO1Q01740 532 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 POU5F1Q01860 360 aaKnown RBP18.57■□□□□ 0.56
RPAIN-208ENST00000571043 PTK7Q13308 1070 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 UBE2Q1Q7Z7E8 422 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 ZNF677Q86XU0 584 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 FAM126BQ8IXS8 530 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 SLC35G2Q8TBE7 412 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 UBE2Q2Q8WVN8 375 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 HNRNPLLQ8WVV9 542 aaKnown RBP18.57■□□□□ 0.56
RPAIN-208ENST00000571043 DNAJB3Q8WWF6 145 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 PBKQ96KB5 322 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 PCDHB18PQ96TA0 734 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 IFT122Q9HBG6 1241 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 AKT3Q9Y243 479 aa18.57■□□□□ 0.56
RPAIN-208ENST00000571043 PHACTR2O75167 634 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 CD4P01730 458 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 RHOXF2BP0C7M4 288 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 MCM3P25205 808 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 TNFSF9P41273 254 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 ATN1P54259 1190 aaPredicted RBP18.56■□□□□ 0.56
RPAIN-208ENST00000571043 GPC5P78333 572 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 CUL2Q13617 745 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 ZNF568Q3ZCX4 644 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 WDR93Q6P2C0 686 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 ANKRD33Q7Z3H0 272 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 SPATA4Q8NEY3 305 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 OR5B17Q8NGF7 314 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
RPAIN-208ENST00000571043 TOX2Q96NM4 488 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 RHOXF2Q9BQY4 288 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 FAM49AQ9H0Q0 323 aaPredicted RBP18.56■□□□□ 0.56
RPAIN-208ENST00000571043 THAP2Q9H0W7 228 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 ABCB6Q9NP58 842 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 ZNF446Q9NWS9 450 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 STXBP5LQ9Y2K9 1186 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
RPAIN-208ENST00000571043 ZRANB2O95218 330 aaKnown RBP eCLIP18.55■□□□□ 0.56
RPAIN-208ENST00000571043 VTNP04004 478 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 CLTAP09496 248 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 KRT5P13647 590 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 ABCB4P21439 1286 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 CXCR5P32302 372 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 NCOA4Q13772 614 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 DUOXA2Q1HG44 320 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 SEZ6Q53EL9 994 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 TAF3Q5VWG9 929 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 CCDC70Q6NSX1 233 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 CC2D1AQ6P1N0 951 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-208ENST00000571043 PEX26Q7Z412 305 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 ARHGEF26Q96DR7 871 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 PNKPQ96T60 521 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 PSMB7Q99436 277 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 MINDY3Q9H8M7 445 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 APOBEC3GQ9HC16 384 aaKnown RBP18.55■□□□□ 0.56
RPAIN-208ENST00000571043 ARFGAP3Q9NP61 516 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 NOD1Q9Y239 953 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 PCDHB2Q9Y5E7 798 aa18.55■□□□□ 0.56
RPAIN-208ENST00000571043 ERLIN1O75477 346 aa18.54■□□□□ 0.56
RPAIN-208ENST00000571043 MMEP08473 750 aa18.54■□□□□ 0.56
RPAIN-208ENST00000571043 MCF2P10911 925 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms