RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 AFF4Q9UHB7 1163 aaKnown RBP23.02■■□□□ 1.28
PKD1-240ENST00000570253 KIF3AQ9Y496 699 aa23.02■■□□□ 1.28
PKD1-240ENST00000570253 CACNA1AO00555 2505 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 OTOGLQ3ZCN5 2332 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 IGFBP6P24592 240 aaPredicted RBP23.01■■□□□ 1.27
PKD1-240ENST00000570253 NRLP54845 237 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 NBR1Q14596 966 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 NOLC1Q14978 699 aaKnown RBP eCLIP23.01■■□□□ 1.27
PKD1-240ENST00000570253 PRSS36Q5K4E3 855 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 C4orf32Q8N8J7 132 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 DEPDC1BQ8WUY9 529 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 ZMAT2Q96NC0 199 aaKnown RBP23.01■■□□□ 1.27
PKD1-240ENST00000570253 OXCT2Q9BYC2 517 aaPredicted RBP23.01■■□□□ 1.27
PKD1-240ENST00000570253 PLA2G2FQ9BZM2 168 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 PPP4R2Q9NY27 417 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 RAB23Q9ULC3 237 aa23.01■■□□□ 1.27
PKD1-240ENST00000570253 NDRG2Q9UN36 371 aaKnown RBP23.01■■□□□ 1.27
PKD1-240ENST00000570253 H0YCG3 227 aa23■■□□□ 1.27
PKD1-240ENST00000570253 SLC16A4O15374 487 aa23■■□□□ 1.27
PKD1-240ENST00000570253 TOM1L1O75674 476 aa23■■□□□ 1.27
PKD1-240ENST00000570253 PROZP22891 400 aa23■■□□□ 1.27
PKD1-240ENST00000570253 PRPHP41219 470 aa23■■□□□ 1.27
PKD1-240ENST00000570253 PLD1Q13393 1074 aa23■■□□□ 1.27
PKD1-240ENST00000570253 GRM2Q14416 872 aa23■■□□□ 1.27
PKD1-240ENST00000570253 ZRSR1Q15695 479 aaKnown RBP23■■□□□ 1.27
PKD1-240ENST00000570253 RINT1Q6NUQ1 792 aa23■■□□□ 1.27
PKD1-240ENST00000570253 E2F7Q96AV8 911 aa23■■□□□ 1.27
PKD1-240ENST00000570253 CDK5RAP3Q96JB5 506 aa23■■□□□ 1.27
PKD1-240ENST00000570253 GPR88Q9GZN0 384 aa23■■□□□ 1.27
PKD1-240ENST00000570253 SLITRK6Q9H5Y7 841 aa23■■□□□ 1.27
PKD1-240ENST00000570253 GMEB2Q9UKD1 530 aa23■■□□□ 1.27
PKD1-240ENST00000570253 SMG5Q9UPR3 1016 aaKnown RBP23■■□□□ 1.27
PKD1-240ENST00000570253 DCHS1Q96JQ0 3298 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 XPOTO43592 962 aaKnown RBP22.99■■□□□ 1.27
PKD1-240ENST00000570253 TBC1D4O60343 1298 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 MYL4P12829 197 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 PSMC3P17980 439 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 U2AF2P26368 475 aaKnown RBP eCLIP22.99■■□□□ 1.27
PKD1-240ENST00000570253 TWF1Q12792 350 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 MRPL58Q14197 206 aaKnown RBP22.99■■□□□ 1.27
PKD1-240ENST00000570253 FAM78AQ5JUQ0 283 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 KCTD17Q8N5Z5 321 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 ZBTB44Q8NCP5 570 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 DDX12PQ92771 950 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 SMARCD2Q92925 531 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 C18orf25Q96B23 403 aaPredicted RBP22.99■■□□□ 1.27
PKD1-240ENST00000570253 TCEAL4Q96EI5 215 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 BICD1Q96G01 975 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 ASB16Q96NS5 453 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 RUSC1Q9BVN2 902 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 PCDHB8Q9UN66 801 aa22.99■■□□□ 1.27
PKD1-240ENST00000570253 COL4A3Q01955 1670 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 ZNF263O14978 683 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 CLDN3O15551 220 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 SEC24AO95486 1093 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 GUCY2CP25092 1073 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 GDI1P31150 447 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 YWHAHQ04917 246 aaPredicted RBP22.98■■□□□ 1.27
PKD1-240ENST00000570253 RSPO4Q2I0M5 234 aaPredicted RBP22.98■■□□□ 1.27
PKD1-240ENST00000570253 C1orf228Q6PIY5 440 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 ZPBP2Q6X784 338 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 TAS1R3Q7RTX0 852 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 USP37Q86T82 979 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 YAF2Q8IY57 180 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 DAW1Q8N136 415 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 SPIRE2Q8WWL2 714 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 EPC1Q9H2F5 836 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 PRMT8Q9NR22 394 aaPredicted RBP22.98■■□□□ 1.27
PKD1-240ENST00000570253 DLL3Q9NYJ7 618 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 PCDHB6Q9Y5E3 794 aa22.98■■□□□ 1.27
PKD1-240ENST00000570253 PRR5-ARHGAP8B1AHC4 643 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 PLS3P13797 630 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 FCARP24071 287 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 ARHGAP8P85298 464 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 LMNB2Q03252 620 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 KYAT1Q16773 422 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 C1orf186Q6ZWK4 172 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 CSGALNACT1Q8TDX6 532 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 FAM3CQ92520 227 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 NTPCRQ9BSD7 190 aaKnown RBP22.97■■□□□ 1.27
PKD1-240ENST00000570253 PLEKHA5Q9HAU0 1116 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 ZNF334Q9HCZ1 680 aaPredicted RBP22.97■■□□□ 1.27
PKD1-240ENST00000570253 TRPV5Q9NQA5 729 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 KCND2Q9NZV8 630 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 PIAS3Q9Y6X2 628 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 MYH11P35749 1972 aa22.97■■□□□ 1.27
PKD1-240ENST00000570253 DMXL1Q9Y485 3027 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 SFI1A8K8P3 1242 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 PP2D1A8MPX8 630 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 CCR3P51677 355 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 PPP2R3AQ06190 1150 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 MTAPQ13126 283 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 MSANTD3Q96H12 275 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 CHRDQ9H2X0 955 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 LARSQ9P2J5 1176 aaKnown RBP22.96■■□□□ 1.27
PKD1-240ENST00000570253 USP18Q9UMW8 372 aa22.96■■□□□ 1.27
PKD1-240ENST00000570253 UBQLN1Q9UMX0 589 aaKnown RBP22.96■■□□□ 1.27
PKD1-240ENST00000570253 MED19A0JLT2 244 aaPredicted RBP22.95■■□□□ 1.26
PKD1-240ENST00000570253 LILRB5O75023 590 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms