RNA–Protein interactions for RNA: ENST00000568508.5

EPB42-207, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 5

Gene EPB42, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-207ENST00000568508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.31■□□□□ 0.2
EPB42-207ENST00000568508 TMEM139Q8IV31 216 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 LRRC8AQ8IWT6 810 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 NLRC4Q9NPP4 1024 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.2
EPB42-207ENST00000568508 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 PPEF2O14830 753 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 PHACTR2O75167 634 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 STAU1O95793 577 aaKnown RBP16.31■□□□□ 0.2
EPB42-207ENST00000568508 SCNN1GP51170 649 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 IKBKEQ14164 716 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 WDR59Q6PJI9 974 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 RRAGAQ7L523 313 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 TMEM199Q8N511 208 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 RNF169Q8NCN4 708 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 BEST2Q8NFU1 509 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 STK33Q9BYT3 514 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 UBE2TQ9NPD8 197 aaPredicted RBP16.31■□□□□ 0.2
EPB42-207ENST00000568508 ABHD10Q9NUJ1 306 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 PYCARDQ9ULZ3 195 aa16.31■□□□□ 0.2
EPB42-207ENST00000568508 MICAL3Q7RTP6 2002 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 THP07101 528 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 FGFR1P11362 822 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
EPB42-207ENST00000568508 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
EPB42-207ENST00000568508 RBP5P82980 135 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 GCNT1Q02742 428 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 C9orf57Q5W0N0 161 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 CNGA4Q8IV77 575 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 OR8K1Q8NGG5 319 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 NT5C1BQ96P26 610 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 PANX2Q96RD6 677 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 GOLGA2P5Q9HBQ8 144 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 MYO6Q9UM54 1294 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
EPB42-207ENST00000568508 PFKMP08237 780 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 RFX1P22670 979 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 ATICP31939 592 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 NOP14P78316 857 aaKnown RBP16.29■□□□□ 0.2
EPB42-207ENST00000568508 MEA1Q16626 185 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 RPUSD2Q8IZ73 545 aaKnown RBP16.29■□□□□ 0.2
EPB42-207ENST00000568508 TAF4BQ92750 862 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 BADQ92934 168 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 FAXDC2Q96IV6 333 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 CASD1Q96PB1 797 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 IL23AQ9NPF7 189 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 AIPL1Q9NZN9 384 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 LRRC53A6NM62 1247 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 FOXN3O00409 490 aaPredicted RBP16.29■□□□□ 0.2
EPB42-207ENST00000568508 B4GALT3O60512 393 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 ACRP10323 421 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
EPB42-207ENST00000568508 EPHB4P54760 987 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 DSC1Q08554 894 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 TRPC3Q13507 836 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
EPB42-207ENST00000568508 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 IRF2BP2Q7Z5L9 587 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 C7orf61Q8IZ16 206 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 LRRC52Q8N7C0 313 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 UBR7Q8N806 425 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 CCDC150Q8NCX0 1101 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 SHC3Q92529 594 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 SYN2Q92777 582 aaPredicted RBP16.29■□□□□ 0.2
EPB42-207ENST00000568508 ARID3AQ99856 593 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 SLC38A7Q9NVC3 462 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 PCDHB7Q9Y5E2 793 aa16.29■□□□□ 0.2
EPB42-207ENST00000568508 SCN1AP35498 2009 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 F8VZ95 297 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 XPOTO43592 962 aaKnown RBP16.28■□□□□ 0.2
EPB42-207ENST00000568508 POMCP01189 267 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 KRT19P08727 400 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 CCZ1BP86790 482 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 CCZ1P86791 482 aaPredicted RBP16.28■□□□□ 0.2
EPB42-207ENST00000568508 GRIK3Q13003 919 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 NOMO2Q5JPE7 1267 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 GLB1LQ6UWU2 654 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 CD300LGQ6UXG3 332 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 CACNA2D4Q7Z3S7 1137 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 NPAS4Q8IUM7 802 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 PPM1KQ8N3J5 372 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 HPDLQ96IR7 371 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 RPS6KC1Q96S38 1066 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 BCO2Q9BYV7 579 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 CACNG4Q9UBN1 327 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 CNTN6Q9UQ52 1028 aa16.28■□□□□ 0.2
EPB42-207ENST00000568508 COL4A6Q14031 1691 aa16.27■□□□□ 0.2
EPB42-207ENST00000568508 SPTLC1O15269 473 aa16.27■□□□□ 0.2
EPB42-207ENST00000568508 DDHD2O94830 711 aa16.27■□□□□ 0.2
EPB42-207ENST00000568508 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.2
EPB42-207ENST00000568508 ASPAP45381 313 aa16.27■□□□□ 0.2
EPB42-207ENST00000568508 CUL2Q13617 745 aa16.27■□□□□ 0.2
EPB42-207ENST00000568508 ENOSF1Q7L5Y1 443 aa16.27■□□□□ 0.2
EPB42-207ENST00000568508 LIMS2Q7Z4I7 341 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms