RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 LRPAP1P30533 357 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 ACOT2P49753 483 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 PPP2R3AQ06190 1150 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 VARS2Q5ST30 1063 aaKnown RBP27.35■■□□□ 1.97
FANCA-228ENST00000567943 CNNM4Q6P4Q7 775 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 CYP26C1Q6V0L0 522 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 TRIM67Q6ZTA4 783 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 CCDC149Q6ZUS6 474 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 HFE2Q6ZVN8 426 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 CEP57L1Q8IYX8 460 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 TDRD5Q8NAT2 981 aaKnown RBP27.35■■□□□ 1.97
FANCA-228ENST00000567943 SMG7Q92540 1137 aaKnown RBP27.35■■□□□ 1.97
FANCA-228ENST00000567943 KIF12Q96FN5 646 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 SUSD3Q96L08 255 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 PRKD2Q9BZL6 878 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 BLZF1Q9H2G9 400 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 GDPD2Q9HCC8 539 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 ZNF318Q5VUA4 2279 aa27.35■■□□□ 1.97
FANCA-228ENST00000567943 NOTCH4Q99466 2003 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 PRPF6O94906 941 aaKnown RBP27.34■■□□□ 1.97
FANCA-228ENST00000567943 ASGR2P07307 311 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 MRPL58Q14197 206 aaKnown RBP27.34■■□□□ 1.97
FANCA-228ENST00000567943 ELMSAN1Q6PJG2 1045 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 CRELD2Q6UXH1 353 aaPredicted RBP27.34■■□□□ 1.97
FANCA-228ENST00000567943 ANKS3Q6ZW76 656 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 SYCP3Q8IZU3 236 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 POMGNT1Q8WZA1 660 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 FAM212AQ96EL1 285 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 LIMD1Q9UGP4 676 aa27.34■■□□□ 1.97
FANCA-228ENST00000567943 AGO2Q9UKV8 859 aaKnown RBP27.34■■□□□ 1.97
FANCA-228ENST00000567943 SYN3O14994 580 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 SLFN14P0C7P3 912 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 CYP3A5P20815 502 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 POSTNQ15063 836 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 JADE1Q6IE81 842 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 GRAMD1CQ8IYS0 662 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 GLIS3Q8NEA6 775 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 ZSWIM2Q8NEG5 633 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 SMOC2Q9H3U7 446 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 UBQLN1Q9UMX0 589 aaKnown RBP27.33■■□□□ 1.97
FANCA-228ENST00000567943 NUB1Q9Y5A7 615 aa27.33■■□□□ 1.97
FANCA-228ENST00000567943 SCN1AP35498 2009 aa27.33■■□□□ 1.96
FANCA-228ENST00000567943 PPEF2O14830 753 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 ACTN4O43707 911 aaKnown RBP27.32■■□□□ 1.96
FANCA-228ENST00000567943 NFICP08651 508 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 CUL4BQ13620 913 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 SLC8B1Q6J4K2 584 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 STXBP4Q6ZWJ1 553 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 UNC13DQ70J99 1090 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 HPSEQ9Y251 543 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 CLUHO75153 1309 aa27.32■■□□□ 1.96
FANCA-228ENST00000567943 C8AP07357 584 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 MCM4P33991 863 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 AARSP49588 968 aaKnown RBP eCLIP27.31■■□□□ 1.96
FANCA-228ENST00000567943 FAM26FQ5R3K3 315 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 SPATA1Q5VX52 437 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 OTOP3Q7RTS5 596 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 ASIC4Q96FT7 647 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 TMEM206Q9H813 350 aa27.31■■□□□ 1.96
FANCA-228ENST00000567943 TMEM221A6NGB7 291 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 M0QZQ0 153 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 M0R296 226 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 ROR1Q01973 937 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 PLCD3Q8N3E9 789 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 PAGE5Q96GU1 130 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 MYADMQ96S97 322 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 TSPAN18Q96SJ8 248 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 SORCS3Q9UPU3 1222 aa27.3■■□□□ 1.96
FANCA-228ENST00000567943 ZDBF2Q9HCK1 2354 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 WDR27A2RRH5 827 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 ABLIM3O94929 683 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 SYKP43405 635 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 NDUFA8P51970 172 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 WNT7BP56706 349 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 SIGLEC14Q08ET2 396 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 LIN9Q5TKA1 542 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 CD302Q8IX05 232 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 FSIP1Q8NA03 581 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 SLC7A14Q8TBB6 771 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 ACSF2Q96CM8 615 aaPredicted RBP27.29■■□□□ 1.96
FANCA-228ENST00000567943 PIDD1Q9HB75 910 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 USP25Q9UHP3 1055 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 FBXL5Q9UKA1 691 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 PCDHB8Q9UN66 801 aa27.29■■□□□ 1.96
FANCA-228ENST00000567943 TSC2P49815 1807 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 FAM237AA0A1B0GTK4 181 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 PVALEFA0A1B0GWK0 134 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 A0A1W2PQ27 194 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 A0A1W2PQ64 194 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 A0A1W2PQD8 194 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 XPOTO43592 962 aaKnown RBP27.28■■□□□ 1.96
FANCA-228ENST00000567943 HNRNPA1P09651 372 aaKnown RBP eCLIP27.28■■□□□ 1.96
FANCA-228ENST00000567943 HOXA9P31269 272 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 HOXD13P35453 343 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 EHHADHQ08426 723 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 PPM1LQ5SGD2 360 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 BMP8AQ7Z5Y6 402 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 ZNF461Q8TAF7 563 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 SAAL1Q96ER3 474 aa27.28■■□□□ 1.96
FANCA-228ENST00000567943 ASB7Q9H672 318 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms