RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 MATR3P43243 847 aaKnown RBP eCLIP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 AARSP49588 968 aaKnown RBP eCLIP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 RESTQ13127 1097 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 ENOX2Q16206 610 aaKnown RBP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 PABPC1LQ4VXU2 614 aaKnown RBP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 PARM1Q6UWI2 310 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 USP49Q70CQ1 688 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 MAP4K3Q8IVH8 894 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 CD302Q8IX05 232 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 RASSF8Q8NHQ8 419 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 ITFG1Q8TB96 612 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 DDX12PQ92771 950 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 ATOH1Q92858 354 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 FGF14Q92915 247 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 OXCT2Q9BYC2 517 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 HCFC1R1Q9NWW0 138 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 STK17AQ9UEE5 414 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 FBXO2Q9UK22 296 aaPredicted RBP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 UBQLN1Q9UMX0 589 aaKnown RBP15.51■□□□□ 0.07
COMMD4-216ENST00000567023 PCDHB8Q9UN66 801 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 CFAP54Q96N23 3096 aa15.51■□□□□ 0.07
COMMD4-216ENST00000567023 LACTBL1A8MY62 500 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 XPOTO43592 962 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 TBCAO75347 108 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 OAZ2O95190 189 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 KRT18P05783 430 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 POU5F1Q01860 360 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 PPP2R3AQ06190 1150 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 CTXN3Q4LDR2 81 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 ZNF280DQ6N043 979 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 PHLDB3Q6NSJ2 640 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 SLC39A4Q6P5W5 647 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 NPAS3Q8IXF0 933 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 KRI1Q8N9T8 703 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 GPR152Q8TDT2 470 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 KIF12Q96FN5 646 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 RPP25Q9BUL9 199 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 RPF1Q9H9Y2 349 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 GDE1Q9NZC3 331 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 CPSF3Q9UKF6 684 aaKnown RBP15.5■□□□□ 0.07
COMMD4-216ENST00000567023 STYXL1Q9Y6J8 313 aa15.5■□□□□ 0.07
COMMD4-216ENST00000567023 MICAL2O94851 1124 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 SEC24AO95486 1093 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 RHOP08100 348 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 PTPN2P17706 415 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 PAX3P23760 479 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-216ENST00000567023 NMT1P30419 496 aaKnown RBP15.49■□□□□ 0.07
COMMD4-216ENST00000567023 YWHAHQ04917 246 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-216ENST00000567023 SPAG1Q07617 926 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 SPECC1Q5M775 1068 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 ZBTB41Q5SVQ8 909 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 SPATA1Q5VX52 437 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 ZNF720Q7Z2F6 126 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 CCDC105Q8IYK2 499 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 BEST2Q8NFU1 509 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 MSTO1Q9BUK6 570 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 STRA6Q9BX79 667 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 ZHX3Q9H4I2 956 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 ZSCAN16Q9H4T2 348 aaPredicted RBP15.49■□□□□ 0.07
COMMD4-216ENST00000567023 CYP4F11Q9HBI6 524 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 FAM86C1Q9NVL1 165 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 SEL1LQ9UBV2 794 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 CCDC39Q9UFE4 941 aa15.49■□□□□ 0.07
COMMD4-216ENST00000567023 AFF4Q9UHB7 1163 aaKnown RBP15.49■□□□□ 0.07
COMMD4-216ENST00000567023 PRRG1O14668 218 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 PPP1R37O75864 691 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 LRG1P02750 347 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 NBL1P41271 181 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 STARD6P59095 220 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 GPC5P78333 572 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 ZC2HC1CQ53FD0 456 aaPredicted RBP15.48■□□□□ 0.07
COMMD4-216ENST00000567023 SLFN12LQ6IEE8 588 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 FAM173BQ6P4H8 233 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 ASB7Q9H672 318 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 ARHGEF3Q9NR81 526 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 CA14Q9ULX7 337 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 MTMR6Q9Y217 621 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 DERAQ9Y315 318 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 MRPS23Q9Y3D9 190 aaKnown RBP15.48■□□□□ 0.07
COMMD4-216ENST00000567023 INSL5Q9Y5Q6 135 aa15.48■□□□□ 0.07
COMMD4-216ENST00000567023 ANKRD63C9JTQ0 380 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 TXLNAP40222 546 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 ARPP19P56211 112 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 LILRA4P59901 499 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 ADCY1Q08828 1119 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 SLC39A14Q15043 492 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 PRSS36Q5K4E3 855 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 RRAGBQ5VZM2 374 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 POTEHQ6S545 545 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 SV2BQ7L1I2 683 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 TMEM130Q8N3G9 435 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 DTWD2Q8NBA8 298 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 ST13P5Q8NFI4 369 aaPredicted RBP15.47■□□□□ 0.07
COMMD4-216ENST00000567023 DNAJC19Q96DA6 116 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 CLIC6Q96NY7 704 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 TBC1D17Q9HA65 648 aa15.47■□□□□ 0.07
COMMD4-216ENST00000567023 C2CD2Q9Y426 696 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms