RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 LILRB3O75022 631 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 DLATP10515 647 aaKnown RBP28.24■■■□□ 2.11
NME3-209ENST00000566600 TNNI1P19237 187 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 FGFR3P22607 806 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 BRCC3P46736 316 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 DUSP6Q16828 381 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 CEP57Q86XR8 500 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 EFHBQ8N7U6 833 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 RIN2Q8WYP3 895 aaPredicted RBP28.24■■■□□ 2.11
NME3-209ENST00000566600 SUSD3Q96L08 255 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 CGRRF1Q99675 332 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 IGFLR1Q9H665 355 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 COG5Q9UP83 839 aa28.24■■■□□ 2.11
NME3-209ENST00000566600 R3HCC1Q9Y3T6 440 aaKnown RBP28.24■■■□□ 2.11
NME3-209ENST00000566600 PPP1R3GB7ZBB8 358 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 C2CD2LO14523 706 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 SYN3O14994 580 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 IGFBP6P24592 240 aaPredicted RBP28.23■■■□□ 2.11
NME3-209ENST00000566600 PSMC2P35998 433 aaKnown RBP28.23■■■□□ 2.11
NME3-209ENST00000566600 PNPLA4P41247 253 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 CASP4P49662 377 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 AP3M2P53677 418 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 COL19A1Q14993 1142 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 FOXR2Q6PJQ5 311 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 PIK3R5Q8WYR1 880 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 PABPC5Q96DU9 382 aaKnown RBP28.23■■■□□ 2.11
NME3-209ENST00000566600 B3GALT6Q96L58 329 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 ZNF560Q96MR9 790 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 MTMR12Q9C0I1 747 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 RXFP1Q9HBX9 757 aa28.23■■■□□ 2.11
NME3-209ENST00000566600 BICDL2A1A5D9 508 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 ARHGEF37A1IGU5 675 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 PER2O15055 1255 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 CD44P16070 742 aaKnown RBP28.22■■■□□ 2.11
NME3-209ENST00000566600 LILRA4P59901 499 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 FKBP3Q00688 224 aaKnown RBP28.22■■■□□ 2.11
NME3-209ENST00000566600 RTP2Q5QGT7 225 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 ANKRD40Q6AI12 368 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 PPFIBP1Q86W92 1011 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 C1orf127Q8N9H9 656 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 APPL2Q8NEU8 664 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 TMC2Q8TDI7 906 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 PARD3BQ8TEW8 1205 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 HLA-CQ95604 372 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 MKNK1Q9BUB5 465 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 FNIP2Q9P278 1114 aa28.22■■■□□ 2.11
NME3-209ENST00000566600 I3L4J1 428 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 ITGB3P05106 788 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 SRGAP2BP0DMP2 458 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 AARSP49588 968 aaKnown RBP eCLIP28.21■■■□□ 2.11
NME3-209ENST00000566600 TAF6P49848 677 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 RBP5P82980 135 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 ENPEPQ07075 957 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 KLHL10Q6JEL2 608 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 INTS8Q75QN2 995 aaKnown RBP28.21■■■□□ 2.11
NME3-209ENST00000566600 FAM186BQ8IYM0 893 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 TMEM130Q8N3G9 435 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 CSGALNACT2Q8N6G5 542 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 KLHL5Q96PQ7 755 aa28.21■■■□□ 2.11
NME3-209ENST00000566600 M0QZQ0 153 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 PPEF2O14830 753 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 CLASP2O75122 1294 aaKnown RBP28.2■■■□□ 2.1
NME3-209ENST00000566600 AKAP3O75969 853 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 ADH1AP07327 375 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 CNPP09543 421 aaKnown RBP28.2■■■□□ 2.1
NME3-209ENST00000566600 KRT13P13646 458 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 PTMSP20962 102 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 TKTP29401 623 aaKnown RBP28.2■■■□□ 2.1
NME3-209ENST00000566600 ADAM15Q13444 863 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 PSMD5Q16401 504 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 CTC1Q2NKJ3 1217 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 SV2CQ496J9 727 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 LMBRD2Q68DH5 695 aaPredicted RBP28.2■■■□□ 2.1
NME3-209ENST00000566600 DSTYKQ6XUX3 929 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 ANKS3Q6ZW76 656 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 LRRC52Q8N7C0 313 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 MLKLQ8NB16 471 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 OR5B17Q8NGF7 314 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 NELFBQ8WX92 580 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 CLDND1Q9NY35 253 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 PCDHB8Q9UN66 801 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 AGAP1Q9UPQ3 857 aa28.2■■■□□ 2.1
NME3-209ENST00000566600 PTPRJQ12913 1337 aa28.19■■■□□ 2.1
NME3-209ENST00000566600 KRT19P08727 400 aa28.19■■■□□ 2.1
NME3-209ENST00000566600 EPB41P11171 864 aaKnown RBP28.19■■■□□ 2.1
NME3-209ENST00000566600 KLRC2P26717 231 aa28.19■■■□□ 2.1
NME3-209ENST00000566600 POLR2BP30876 1174 aaKnown RBP28.19■■■□□ 2.1
NME3-209ENST00000566600 GTF2F1P35269 517 aaKnown RBP eCLIP28.19■■■□□ 2.14e-7■■■□□ 18.9
NME3-209ENST00000566600 CLDN10P78369 228 aa28.19■■■□□ 2.1
NME3-209ENST00000566600 PAK1Q13153 545 aa28.19■■■□□ 2.1
NME3-209ENST00000566600 ZC3H3Q8IXZ2 948 aaKnown RBP28.19■■■□□ 2.1
NME3-209ENST00000566600 LNX1Q8TBB1 728 aaPredicted RBP28.19■■■□□ 2.1
NME3-209ENST00000566600 POP1Q99575 1024 aaKnown RBP28.19■■■□□ 2.1
NME3-209ENST00000566600 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.18■■■□□ 2.1
NME3-209ENST00000566600 TRIM49BA6NDI0 452 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 H7C4K7 107 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 IKBKBO14920 756 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 SLC16A3O15427 465 aaKnown RBP28.18■■■□□ 2.1
NME3-209ENST00000566600 TEX28O15482 410 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 C1RP00736 705 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms