RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 KCNC3Q14003 757 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 SKIV2LQ15477 1246 aaKnown RBP22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 RTP2Q5QGT7 225 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 RDH13Q8NBN7 331 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 GPT2Q8TD30 523 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 AUTS2Q8WXX7 1259 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 DHTKD1Q96HY7 919 aaPredicted RBP22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 EMILIN2Q9BXX0 1053 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 INTS13Q9NVM9 706 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 FNIP2Q9P278 1114 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 ITGA11Q9UKX5 1188 aa22.78■■□□□ 1.24
SHCBP1-205ENST00000566016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 TMEM191BP0C7N4 346 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 IGFBP6P24592 240 aaPredicted RBP22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 MCM4P33991 863 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 ENPEPQ07075 957 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 RBM23Q86U06 439 aaKnown RBP22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 C1orf127Q8N9H9 656 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 HLA-CQ95604 372 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 ANKRD36BP1Q96IX9 119 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 FNBP1Q96RU3 617 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 CGRRF1Q99675 332 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 PTPRJQ12913 1337 aa22.77■■□□□ 1.24
SHCBP1-205ENST00000566016 PLXNA3P51805 1871 aa22.77■■□□□ 1.23
SHCBP1-205ENST00000566016 M0QZQ0 153 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 BIN1O00499 593 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 C1RP00736 705 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 CNPP09543 421 aaKnown RBP22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 GTF2F1P35269 517 aaKnown RBP eCLIP22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 PNPLA4P41247 253 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 BRCC3P46736 316 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 LILRA4P59901 499 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 CLDN10P78369 228 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 ADAM15Q13444 863 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 DUOXA2Q1HG44 320 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 TMEM184AQ6ZMB5 413 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 PPFIBP1Q86W92 1011 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 ZC3H3Q8IXZ2 948 aaKnown RBP22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 CXorf38Q8TB03 319 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 RIN2Q8WYP3 895 aaPredicted RBP22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 B3GALT6Q96L58 329 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 TSG101Q99816 390 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 MKNK1Q9BUB5 465 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 MTMR12Q9C0I1 747 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 GZF1Q9H116 711 aaPredicted RBP22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 UBE2ZQ9H832 354 aaPredicted RBP22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 THEGQ9P2T0 379 aa22.76■■□□□ 1.23
SHCBP1-205ENST00000566016 C2CD2LO14523 706 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 PER2O15055 1255 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 ADH1AP07327 375 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 CCNE1P24864 410 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 CA8P35219 290 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 CASP4P49662 377 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 ISM2Q6H9L7 571 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 ANKS3Q6ZW76 656 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 USP37Q86T82 979 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 TMEM130Q8N3G9 435 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 LRRC52Q8N7C0 313 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 PARD3BQ8TEW8 1205 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 ZNF560Q96MR9 790 aa22.75■■□□□ 1.23
SHCBP1-205ENST00000566016 PPP1R3GB7ZBB8 358 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 PPEF2O14830 753 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 CLASP2O75122 1294 aaKnown RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 AKAP3O75969 853 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 GLP2RO95838 553 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 TNNC2P02585 160 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 SRGAP2BP0DMP2 458 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 DLATP10515 647 aaKnown RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 CD44P16070 742 aaKnown RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 NDUFV1P49821 464 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 AP3M2P53677 418 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 MCCD1P59942 119 aaPredicted RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 FKBP3Q00688 224 aaKnown RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 ADAM9Q13443 819 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 CEP135Q66GS9 1140 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 INTS8Q75QN2 995 aaKnown RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 CEP57Q86XR8 500 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 OR5B17Q8NGF7 314 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 LNX1Q8TBB1 728 aaPredicted RBP22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 TMC2Q8TDI7 906 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 CCDC127Q96BQ5 260 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 KLHL5Q96PQ7 755 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 CLDND1Q9NY35 253 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 MTRRQ9UBK8 725 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 PCDHB8Q9UN66 801 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 A0A0C4DFX4 3053 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 NCOR1O75376 2440 aa22.74■■□□□ 1.23
SHCBP1-205ENST00000566016 ARHGEF37A1IGU5 675 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 I3L4J1 428 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 TEX28O15482 410 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 ITGB3P05106 788 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 TNNI1P19237 187 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 TKTP29401 623 aaKnown RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 PSMC2P35998 433 aaKnown RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 TAF6P49848 677 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 PMS1P54277 932 aaKnown RBP22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 PSMD5Q16401 504 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 APPL2Q8NEU8 664 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 IGFLR1Q9H665 355 aa22.73■■□□□ 1.23
SHCBP1-205ENST00000566016 SIX4Q9UIU6 781 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms