RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 CLTAP09496 248 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 CEBPBP17676 345 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 NMT1P30419 496 aaKnown RBP25.88■■□□□ 1.73
RAB40C-209ENST00000565511 RESTQ13127 1097 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 ASCL5Q7RTU5 278 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 KIF12Q96FN5 646 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 PARVGQ9HBI0 331 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 ARHGEF3Q9NR81 526 aa25.88■■□□□ 1.73
RAB40C-209ENST00000565511 MIA3Q5JRA6 1907 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 VNN2O95498 520 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 BMP15O95972 392 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 LRPAP1P30533 357 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 LIG4P49917 911 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 CTXN3Q4LDR2 81 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 FRMD5Q7Z6J6 570 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 TCEAL4Q96EI5 215 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 RTP3Q9BQQ7 232 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 FOXQ1Q9C009 403 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 IRF2BPLQ9H1B7 796 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 PCDHB8Q9UN66 801 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 TIMM13Q9Y5L4 95 aaPredicted RBP25.87■■□□□ 1.73
RAB40C-209ENST00000565511 SCN1AP35498 2009 aa25.87■■□□□ 1.73
RAB40C-209ENST00000565511 ANKRD63C9JTQ0 380 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 PROB1E7EW31 1015 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 HNRNPDLO14979 420 aaKnown RBP25.86■■□□□ 1.73
RAB40C-209ENST00000565511 MARCKSP29966 332 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-209ENST00000565511 NBL1P41271 181 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 CCR2P41597 374 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 ZC2HC1CQ53FD0 456 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-209ENST00000565511 LARP4BQ92615 738 aaKnown RBP25.86■■□□□ 1.73
RAB40C-209ENST00000565511 PLA2G2FQ9BZM2 168 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 ZHX3Q9H4I2 956 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 PLEKHA5Q9HAU0 1116 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 CYP4F11Q9HBI6 524 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 KCNG1Q9UIX4 513 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 FBXO2Q9UK22 296 aaPredicted RBP25.86■■□□□ 1.73
RAB40C-209ENST00000565511 KCNH3Q9ULD8 1083 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 MRPS23Q9Y3D9 190 aaKnown RBP25.86■■□□□ 1.73
RAB40C-209ENST00000565511 INSL5Q9Y5Q6 135 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 FAM186AA6NE01 2351 aa25.86■■□□□ 1.73
RAB40C-209ENST00000565511 H0YCG3 227 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 H7C4K7 107 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 STK25O00506 426 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 TRAK2O60296 914 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 LRRN2O75325 713 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 DCNP07585 359 aaKnown RBP25.85■■□□□ 1.73
RAB40C-209ENST00000565511 ATF2P15336 505 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 AARSP49588 968 aaKnown RBP eCLIP25.85■■□□□ 1.733e-8■■■■■ 29.1
RAB40C-209ENST00000565511 ANGPT1Q15389 498 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 PRSS36Q5K4E3 855 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 ZNF280DQ6N043 979 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 TCEAL8Q8IYN2 117 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 MCRS1Q96EZ8 462 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 CLIC6Q96NY7 704 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 CCSER1Q9C0I3 900 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 DLGAP2Q9P1A6 1054 aa25.85■■□□□ 1.73
RAB40C-209ENST00000565511 CFAP54Q96N23 3096 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 CACNA1IQ9P0X4 2223 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 A0A0B4J269 797 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 M0QZQ0 153 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 PRRG1O14668 218 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 OGTO15294 1046 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 ADRB2P07550 413 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 OR4Q2P0C623 313 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 GLULP15104 373 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 PTPRZ1P23471 2315 aaPredicted RBP25.84■■□□□ 1.73
RAB40C-209ENST00000565511 PPP2R3AQ06190 1150 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 RNF19BQ6ZMZ0 732 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 RTL10Q7L3V2 364 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 MAP4K3Q8IVH8 894 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 RASSF8Q8NHQ8 419 aa25.84■■□□□ 1.73
RAB40C-209ENST00000565511 UBQLN1Q9UMX0 589 aaKnown RBP25.84■■□□□ 1.73
RAB40C-209ENST00000565511 COL4A2P08572 1712 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 PRR23AA6NEV1 266 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 LRG1P02750 347 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 KRT18P05783 430 aaKnown RBP25.83■■□□□ 1.73
RAB40C-209ENST00000565511 NFICP08651 508 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 GTF2BQ00403 316 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 ADCY1Q08828 1119 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 JADE1Q6IE81 842 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 PHLDB3Q6NSJ2 640 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 MTSS1LQ765P7 747 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 HS6ST3Q8IZP7 471 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 CORO1BQ9BR76 489 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 MSTO1Q9BUK6 570 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 CRISPLD1Q9H336 500 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 AVENQ9NQS1 362 aaPredicted RBP25.83■■□□□ 1.73
RAB40C-209ENST00000565511 CEP72Q9P209 647 aa25.83■■□□□ 1.73
RAB40C-209ENST00000565511 CPSF3Q9UKF6 684 aaKnown RBP25.83■■□□□ 1.73
RAB40C-209ENST00000565511 SPTLC1O15269 473 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 TBCAO75347 108 aaKnown RBP25.82■■□□□ 1.72
RAB40C-209ENST00000565511 MOSPD3O75425 235 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 CYP3A5P20815 502 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 SYT1P21579 422 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 FCARP24071 287 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 ELF1P32519 619 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 SNW1Q13573 536 aaKnown RBP25.82■■□□□ 1.72
RAB40C-209ENST00000565511 SFR1Q86XK3 245 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 APPL2Q8NEU8 664 aa25.82■■□□□ 1.72
RAB40C-209ENST00000565511 RPF1Q9H9Y2 349 aaKnown RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms