RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 SPATA31D4Q6ZUB0 917 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 LCORLQ8N3X6 602 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 Q8NA96 180 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.09□□□□□ -1.75
CHD9-211ENST00000564600 SUPT20HQ8NEM7 779 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 COA7Q96BR5 231 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 RNF31Q96EP0 1072 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 TMX3Q96JJ7 454 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 TLR10Q9BXR5 811 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 ASPSCR1Q9BZE9 553 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 INO80BQ9C086 356 aaPredicted RBP4.09□□□□□ -1.75
CHD9-211ENST00000564600 SLC45A2Q9UMX9 530 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 COX11Q9Y6N1 276 aa4.09□□□□□ -1.75
CHD9-211ENST00000564600 GRM6O15303 877 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 PPFIA4O75335 1185 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 CKBP12277 381 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 MPLP40238 635 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 USP14P54578 494 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 CTXN1P60606 82 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 KIF23Q02241 960 aaPredicted RBP4.08□□□□□ -1.76
CHD9-211ENST00000564600 CYP2A13Q16696 494 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 PTPN21Q16825 1174 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 ZNF362Q5T0B9 420 aaPredicted RBP4.08□□□□□ -1.76
CHD9-211ENST00000564600 GJC2Q5T442 439 aaPredicted RBP4.08□□□□□ -1.76
CHD9-211ENST00000564600 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.08□□□□□ -1.76
CHD9-211ENST00000564600 SLC44A3Q8N4M1 653 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 TBC1D15Q8TC07 691 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 CAVIN3Q969G5 261 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 GPATCH3Q96I76 525 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 MRGPRX4Q96LA9 322 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 SMAD5Q99717 465 aaKnown RBP4.08□□□□□ -1.76
CHD9-211ENST00000564600 C11orf54Q9H0W9 315 aaPredicted RBP4.08□□□□□ -1.76
CHD9-211ENST00000564600 TMX1Q9H3N1 280 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 MANSC1Q9H8J5 431 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 PCDH12Q9NPG4 1184 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 RNF181Q9P0P0 153 aa4.08□□□□□ -1.76
CHD9-211ENST00000564600 SHTN1A0MZ66 631 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 MYADML2A6NDP7 307 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 LRRC14BA6NHZ5 514 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 GPANK1O95872 356 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 HLA-DOAP06340 250 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 CDK4P11802 303 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 FXR1P51114 621 aaKnown RBP eCLIP4.07□□□□□ -1.76
CHD9-211ENST00000564600 CDC42EP1Q00587 391 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 DSC2Q02487 901 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 GEN1Q17RS7 908 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 ABHD17BQ5VST6 288 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 FITM2Q8N6M3 262 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 BOLLQ8N9W6 283 aaKnown RBP4.07□□□□□ -1.76
CHD9-211ENST00000564600 SSH1Q8WYL5 1049 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 FUBP1Q96AE4 644 aaKnown RBP4.07□□□□□ -1.76
CHD9-211ENST00000564600 LRIG1Q96JA1 1093 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 Q96MF0 132 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 RNPEPQ9H4A4 650 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 UNKLQ9H9P5 680 aaKnown RBP4.07□□□□□ -1.76
CHD9-211ENST00000564600 TMEM74BQ9NUR3 256 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 TDP1Q9NUW8 608 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 FRMD4BQ9Y2L6 1034 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 COL4A3BPQ9Y5P4 624 aa4.07□□□□□ -1.76
CHD9-211ENST00000564600 MGST3O14880 152 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 TEX33O43247 280 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 AGFG2O95081 481 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 FOSP01100 380 aaPredicted RBP4.06□□□□□ -1.76
CHD9-211ENST00000564600 ITGB6P18564 788 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 CXCR5P32302 372 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 UTP14CQ5TAP6 766 aaKnown RBP4.06□□□□□ -1.76
CHD9-211ENST00000564600 MIGA2Q7L4E1 593 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 SIMC1Q8NDZ2 872 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 NSUN7Q8NE18 718 aaKnown RBP4.06□□□□□ -1.76
CHD9-211ENST00000564600 HDAC10Q969S8 669 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 BOD1Q96IK1 185 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 VRK1Q99986 396 aaPredicted RBP4.06□□□□□ -1.76
CHD9-211ENST00000564600 KCNE5Q9UJ90 142 aa4.06□□□□□ -1.76
CHD9-211ENST00000564600 MAST3O60307 1309 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 HAUS5O94927 633 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 CD1AP06126 327 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 HKR1P10072 659 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 ALAS1P13196 640 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 FDXRP22570 491 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 VAV2P52735 878 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 CREMQ03060 361 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 TAP1Q03518 808 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 TLE1Q04724 770 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 UAP1L1Q3KQV9 507 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 RSPH3Q86UC2 560 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 PNMA8AQ86V59 439 aaPredicted RBP4.05□□□□□ -1.76
CHD9-211ENST00000564600 FAM98AQ8NCA5 519 aaKnown RBP4.05□□□□□ -1.76
CHD9-211ENST00000564600 TMIEQ8NEW7 156 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 IL17RDQ8NFM7 739 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 NUP133Q8WUM0 1156 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 CLPTM1LQ96KA5 538 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 COQ10AQ96MF6 247 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 KLHL32Q96NJ5 620 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 LRFN3Q9BTN0 628 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 GALNT9Q9HCQ5 603 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 MRPS18AQ9NVS2 196 aaKnown RBP4.05□□□□□ -1.76
CHD9-211ENST00000564600 MTO1Q9Y2Z2 717 aaKnown RBP4.05□□□□□ -1.76
CHD9-211ENST00000564600 NOX1Q9Y5S8 564 aa4.05□□□□□ -1.76
CHD9-211ENST00000564600 PRSS29PA6NIE9 313 aa4.04□□□□□ -1.76
CHD9-211ENST00000564600 E9PLN8 166 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms