RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 A0A0G2JND7 137 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 HADHBP55084 474 aaKnown RBP12.53□□□□□ -0.4
ABCA3-203ENST00000563623 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
ABCA3-203ENST00000563623 DCUN1D2Q6PH85 259 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 IL31RAQ8NI17 732 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 CD101Q93033 1021 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 IWS1Q96ST2 819 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 OSBPL1AQ9BXW6 950 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 EBF2Q9HAK2 575 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 KCND2Q9NZV8 630 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 P4HA2O15460 535 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 ITGB5P18084 799 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 EPHB2P29323 1055 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 PIK3CAP42336 1068 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 SLC8A3P57103 927 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 CAV1Q03135 178 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 PTK6Q13882 451 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 MTFR1Q15390 333 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 NFIL3Q16649 462 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 CLEC16AQ2KHT3 1053 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 MUM1Q2TAK8 710 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 BRDTQ58F21 947 aaPredicted RBP12.53□□□□□ -0.4
ABCA3-203ENST00000563623 C1orf220Q5T0J3 134 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 FYB2Q5VWT5 728 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 TMEM270Q6UE05 265 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 BBOF1Q8ND07 529 aa12.53□□□□□ -0.4
ABCA3-203ENST00000563623 TNRC6CQ9HCJ0 1690 aaKnown RBP12.53□□□□□ -0.4
ABCA3-203ENST00000563623 TLR3O15455 904 aaKnown RBP12.52□□□□□ -0.4
ABCA3-203ENST00000563623 ECE2O60344 883 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 BANF1O75531 89 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 PDIA2Q13087 525 aaKnown RBP12.52□□□□□ -0.4
ABCA3-203ENST00000563623 ZNF394Q53GI3 561 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 PCNX4Q63HM2 1172 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 RFX8Q6ZV50 586 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 RHOT1Q8IXI2 618 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 LMNTD2Q8IXW0 634 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 MCOLN2Q8IZK6 566 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 PARD3BQ8TEW8 1205 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 PSPC1Q8WXF1 523 aaKnown RBP12.52□□□□□ -0.4
ABCA3-203ENST00000563623 L3MBTL3Q96JM7 780 aaPredicted RBP12.52□□□□□ -0.4
ABCA3-203ENST00000563623 CEP170P1Q96L14 293 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 PRMT6Q96LA8 375 aaPredicted RBP12.52□□□□□ -0.4
ABCA3-203ENST00000563623 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 USH1CQ9Y6N9 552 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 LRRD1A4D1F6 860 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 KLHL33A6NCF5 533 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 WDR4P57081 412 aaKnown RBP12.52□□□□□ -0.4
ABCA3-203ENST00000563623 TAS2R40P59535 323 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 MTMR1Q13613 665 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 SYCP2LQ5T4T6 812 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 TMEM8AQ9HCN3 771 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 BATF3Q9NR55 127 aa12.52□□□□□ -0.4
ABCA3-203ENST00000563623 NFIBO00712 420 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 UNC5CO95185 931 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.41
ABCA3-203ENST00000563623 RANBP1P43487 201 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 MGAT5Q09328 741 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 ALCAMQ13740 583 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 FASTKD3Q14CZ7 662 aaKnown RBP12.52□□□□□ -0.41
ABCA3-203ENST00000563623 FAXDC2Q96IV6 333 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 FHDC1Q9C0D6 1143 aaPredicted RBP12.52□□□□□ -0.41
ABCA3-203ENST00000563623 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 C10orf88Q9H8K7 445 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 ZFP69BQ9UJL9 534 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 AGTPBP1Q9UPW5 1226 aa12.52□□□□□ -0.41
ABCA3-203ENST00000563623 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 MXRA7P84157 204 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 CC2D2BQ6DHV5 1058 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 PODNQ7Z5L7 613 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 ITFG2Q969R8 447 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 GRAMD1AQ96CP6 724 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 C12orf65Q9H3J6 166 aaKnown RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 NKX1-2Q9UD57 310 aaPredicted RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 CFAP69A5D8W1 941 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 VIL1P09327 827 aaKnown RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 ACOT2P49753 483 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 POLGP54098 1239 aaPredicted RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 LVRNQ6Q4G3 990 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 VPS52Q8N1B4 723 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 HELQQ8TDG4 1101 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 MCUR1Q96AQ8 359 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 NAF1Q96HR8 494 aaKnown RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 EME2A4GXA9 379 aaPredicted RBP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 DCTN3O75935 186 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 TROVE2P10155 538 aaKnown RBP eCLIP12.51□□□□□ -0.41
ABCA3-203ENST00000563623 PSMC4P43686 418 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 LIG4P49917 911 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 UGCGQ16739 394 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 AOC3Q16853 763 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 TSNAXIP1Q2TAA8 658 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 BBS9Q3SYG4 887 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 GNPTABQ3T906 1256 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 TATDN1Q6P1N9 297 aa12.51□□□□□ -0.41
ABCA3-203ENST00000563623 SYDE1Q6ZW31 735 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms