RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SYNPOQ8N3V7 929 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 TCP11Q8WWU5 503 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 LRRC3BQ96PB8 259 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 TRIM6Q9C030 488 aaPredicted RBP8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 CEP72Q9P209 647 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 KLK13Q9UKR3 277 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 VAV3Q9UKW4 847 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 INSL5Q9Y5Q6 135 aa8.57□□□□□ -1.04
HERPUD1-206ENST00000563343 PCDH15Q96QU1 1955 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 FAM221BA6H8Z2 402 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 GOLGA8AA7E2F4 631 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 CYSRT1A8MQ03 144 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 GOLGA8BA8MQT2 603 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 INO80B-WBP1J3KQ70 363 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 ZBTB39O15060 712 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 THP07101 528 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 ATF2P15336 505 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 GNA11P29992 359 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 RCAN1P53805 252 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 PPP2R5CQ13362 524 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 PON2Q15165 354 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 DAB2IPQ5VWQ8 1189 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 CREB3L3Q68CJ9 461 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 PDZD4Q76G19 769 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 RALGPS2Q86X27 583 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 C4orf19Q8IY42 314 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 TCEAL8Q8IYN2 117 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 C3orf58Q8NDZ4 430 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 CSGALNACT1Q8TDX6 532 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 ASAP3Q8TDY4 903 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 CHFRQ96EP1 664 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 TCEANC2Q96MN5 208 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 MTRQ99707 1265 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 MKNK1Q9BUB5 465 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 LRRC3Q9BY71 257 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 MFRPQ9BY79 579 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 NFKBIZQ9BYH8 718 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 RWDD1Q9H446 243 aaPredicted RBP8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 GTSE1Q9NYZ3 720 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 PARP2Q9UGN5 583 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 NID2Q14112 1375 aa8.56□□□□□ -1.04
HERPUD1-206ENST00000563343 TSC2P49815 1807 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 I3L4J1 428 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 M0R2N6 131 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 PRPF3O43395 683 aaKnown RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 SLC37A4O43826 429 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 KALRNO60229 2985 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 RECQL4O94761 1208 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 CAVIN2O95810 425 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 P4HBP07237 508 aaKnown RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 CCDC192P0DO97 292 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 GLRA2P23416 452 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 YWHABP31946 246 aaKnown RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 ARL2P36404 184 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 BRCC3P46736 316 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 KPNA1P52294 538 aaPredicted RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 NCBP1Q09161 790 aaKnown RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 MXD4Q14582 209 aaPredicted RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 TEAD2Q15562 447 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 KIAA1211LQ6NV74 962 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 MOXD1Q6UVY6 613 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 ANKS3Q6ZW76 656 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 TBCKQ8TEA7 893 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 CCDC12Q8WUD4 166 aaPredicted RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 E2F7Q96AV8 911 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 ZFYVE19Q96K21 471 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 PPP1R10Q96QC0 940 aaKnown RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 POLR3BQ9NW08 1133 aaPredicted RBP8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 CACNA2D2Q9NY47 1150 aa8.55□□□□□ -1.04
HERPUD1-206ENST00000563343 NAV2Q8IVL1 2488 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 KLF18A0A0U1RQI7 1052 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 PRRG1O14668 218 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 DCLK1O15075 740 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 B3GAT3O94766 335 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 PRKCBP05771 671 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 CLCNKBP51801 687 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 CREB5Q02930 508 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 MRPL58Q14197 206 aaKnown RBP8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 NTRK3Q16288 839 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 UPP1Q16831 310 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 COL28A1Q2UY09 1125 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 STXBP5Q5T5C0 1151 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 C19orf48Q6RUI8 117 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 TMC8Q8IU68 726 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 CAMKK1Q8N5S9 505 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 DEFB124Q8NES8 71 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 TTC8Q8TAM2 541 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 BICD2Q8TD16 824 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 LXNQ9BS40 222 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 PDZD7Q9H5P4 517 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 CYP4F11Q9HBI6 524 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 TMEM9BQ9NQ34 198 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 RGL1Q9NZL6 768 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 VPS54Q9P1Q0 977 aa8.54□□□□□ -1.04
HERPUD1-206ENST00000563343 HELZP42694 1942 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms