RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 TPGS2Q68CL5 300 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 C1orf210Q8IVY1 113 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 ADSSL1Q8N142 457 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 APPL2Q8NEU8 664 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 AK8Q96MA6 479 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 CORO1BQ9BR76 489 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 WDR87Q6ZQQ6 2873 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 GVINP1Q7Z2Y8 2422 aa17.17■□□□□ 0.34
CLK3-211ENST00000563297 MIA3Q5JRA6 1907 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 H0YCG3 227 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 SLC26A4O43511 780 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 ECI2O75521 394 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 CEBPBP17676 345 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 MARCKSP29966 332 aaPredicted RBP17.16■□□□□ 0.34
CLK3-211ENST00000563297 LRPAP1P30533 357 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 TNFSF9P41273 254 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLK3-211ENST00000563297 PFKPQ01813 784 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 PRKCQQ04759 706 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 ADCY1Q08828 1119 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 PRSS36Q5K4E3 855 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
CLK3-211ENST00000563297 TANGO2Q6ICL3 276 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 TCEAL4Q96EI5 215 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 REEP2Q9BRK0 252 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 SEMA4AQ9H3S1 761 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 BLOC1S4Q9NUP1 217 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 AFF4Q9UHB7 1163 aaKnown RBP17.16■□□□□ 0.34
CLK3-211ENST00000563297 ODF2LQ9ULJ1 636 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 PCDHB8Q9UN66 801 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 SMC3Q9UQE7 1217 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 MTF2Q9Y483 593 aaPredicted RBP17.16■□□□□ 0.34
CLK3-211ENST00000563297 INSL5Q9Y5Q6 135 aa17.16■□□□□ 0.34
CLK3-211ENST00000563297 FANCMQ8IYD8 2048 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 F5P12259 2224 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 LACTBL1A8MY62 500 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 M0QZQ0 153 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 SP9P0CG40 484 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 CD72P21854 359 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 UBA7P41226 1012 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 CCR2P41597 374 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 MCM2P49736 904 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 DHX8Q14562 1220 aaKnown RBP17.15■□□□□ 0.34
CLK3-211ENST00000563297 ZNF280DQ6N043 979 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 GPBP1Q86WP2 473 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 KIF12Q96FN5 646 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 BICD1Q96G01 975 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 CALML4Q96GE6 196 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 R4GN57 208 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 COL4A3Q01955 1670 aa17.15■□□□□ 0.34
CLK3-211ENST00000563297 FAM170BA6NMN3 283 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 NRG2O14511 850 aaPredicted RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 ZNF197O14709 1029 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 FAM189A1O60320 539 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 MICAL2O94851 1124 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 OAZ2O95190 189 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 PIGRP01833 764 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 CENPBP07199 599 aaPredicted RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 ADRB2P07550 413 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 CYP3A5P20815 502 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 LIG4P49917 911 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 ZNF131P52739 623 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 GRIN1Q05586 938 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 MCM6Q14566 821 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 KYAT1Q16773 422 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 ZBTB41Q5SVQ8 909 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 RNF19BQ6ZMZ0 732 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 MAML2Q8IZL2 1156 aaPredicted RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 HS6ST3Q8IZP7 471 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 MYCT1Q8N699 235 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 ELSPBP1Q96BH3 223 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 ZNF512Q96ME7 567 aaPredicted RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 OSBPL6Q9BZF3 934 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 CEP72Q9P209 647 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 MAFFQ9ULX9 164 aa17.14■□□□□ 0.33
CLK3-211ENST00000563297 UBQLN1Q9UMX0 589 aaKnown RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 TIMM13Q9Y5L4 95 aaPredicted RBP17.14■□□□□ 0.33
CLK3-211ENST00000563297 OGTO15294 1046 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 FAM13AO94988 1023 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 LMNAP02545 664 aaKnown RBP17.13■□□□□ 0.33
CLK3-211ENST00000563297 FCARP24071 287 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 AARSP49588 968 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLK3-211ENST00000563297 YWHAHQ04917 246 aaPredicted RBP17.13■□□□□ 0.33
CLK3-211ENST00000563297 TWF1Q12792 350 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 UBXN2BQ14CS0 331 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 ENOX2Q16206 610 aaKnown RBP17.13■□□□□ 0.33
CLK3-211ENST00000563297 FAM78AQ5JUQ0 283 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 CYP4A22Q5TCH4 519 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 IQCEQ6IPM2 695 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 PDZD4Q76G19 769 aaPredicted RBP17.13■□□□□ 0.33
CLK3-211ENST00000563297 KCNG4Q8TDN1 519 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 BCO2Q9BYV7 579 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 PARVGQ9HBI0 331 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 LTB4R2Q9NPC1 389 aa17.13■□□□□ 0.33
CLK3-211ENST00000563297 A0A0B4J269 797 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 SHISA7A6NL88 538 aa17.12■□□□□ 0.33
CLK3-211ENST00000563297 HNRNPDLO14979 420 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms