RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 PARM1Q6UWI2 310 aa18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 TMEM130Q8N3G9 435 aa18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 KRI1Q8N9T8 703 aaKnown RBP18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 DDX12PQ92771 950 aa18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 ARHGEF3Q9NR81 526 aa18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 PCDHB8Q9UN66 801 aa18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.27■□□□□ 0.52
TNRC6A-209ENST00000562829 MYH15Q9Y2K3 1946 aa18.27■□□□□ 0.51
TNRC6A-209ENST00000562829 LACTBL1A8MY62 500 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 PIGRP01833 764 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 RHOP08100 348 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 ATF2P15336 505 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 ABCD1P33897 745 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 RESTQ13127 1097 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 PTPAQ15257 358 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 ENOX2Q16206 610 aaKnown RBP18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 FAM173BQ6P4H8 233 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 NPAS3Q8IXF0 933 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 KCNN1Q92952 543 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 RPP25Q9BUL9 199 aaKnown RBP18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 TBC1D17Q9HA65 648 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 KCNH3Q9ULD8 1083 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 CACNA1HO95180 2353 aa18.26■□□□□ 0.51
TNRC6A-209ENST00000562829 ARHGEF37A1IGU5 675 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 TBC1D4O60343 1298 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 ABLIM3O94929 683 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 PTPN2P17706 415 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 LRPAP1P30533 357 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 DDIT3P35638 169 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 GUCY2FP51841 1108 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 YWHAHQ04917 246 aaPredicted RBP18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 MRPL58Q14197 206 aaKnown RBP18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 ZC2HC1CQ53FD0 456 aaPredicted RBP18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 TPGS2Q68CL5 300 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 DSTYKQ6XUX3 929 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 USP37Q86T82 979 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 MAP4K3Q8IVH8 894 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 CCDC105Q8IYK2 499 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 ELMOD1Q8N336 334 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 KXD1Q9BQD3 176 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 CORO1BQ9BR76 489 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 SLC2A4RGQ9NR83 387 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 STK17AQ9UEE5 414 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 FBXO2Q9UK22 296 aaPredicted RBP18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 TIMM13Q9Y5L4 95 aaPredicted RBP18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 INSL5Q9Y5Q6 135 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 NOTCH4Q99466 2003 aa18.25■□□□□ 0.51
TNRC6A-209ENST00000562829 A0A0B4J269 797 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 FAM189A1O60320 539 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 GFRA3O60609 400 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 SEC24AO95486 1093 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 CYP3A5P20815 502 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 GPC5P78333 572 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 GTF2BQ00403 316 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 RRAGBQ5VZM2 374 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 JADE1Q6IE81 842 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 SLC39A4Q6P5W5 647 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 SFR1Q86XK3 245 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 TCEAL8Q8IYN2 117 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 BEST2Q8NFU1 509 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 MCRS1Q96EZ8 462 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 CLIC6Q96NY7 704 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 FIZ1Q96SL8 496 aa18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 SRPRBQ9Y5M8 271 aaKnown RBP18.24■□□□□ 0.51
TNRC6A-209ENST00000562829 ZBTB6Q15916 424 aa18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 SLC5A9Q2M3M2 681 aa18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 ADALQ6DHV7 355 aa18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 CD302Q8IX05 232 aa18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 DTWD2Q8NBA8 298 aa18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 AFF4Q9UHB7 1163 aaKnown RBP18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 CPSF3Q9UKF6 684 aaKnown RBP18.23■□□□□ 0.51
TNRC6A-209ENST00000562829 TISP43B9A030 160 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 ANKRD63C9JTQ0 380 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 K7ELQ4 463 aaPredicted RBP18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 M0QZQ0 153 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 TULP1O00294 542 aaPredicted RBP18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 CEBPBP17676 345 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 ACOT2P49753 483 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 TWF1Q12792 350 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 TMEM132DQ14C87 1099 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 SPATA1Q5VX52 437 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 SLFN12LQ6IEE8 588 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 IQCEQ6IPM2 695 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 RNF19BQ6ZMZ0 732 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 PDZD4Q76G19 769 aaPredicted RBP18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 SV2BQ7L1I2 683 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 INTS4Q96HW7 963 aaKnown RBP18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 USP28Q96RU2 1077 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 TSPAN18Q96SJ8 248 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 BACH2Q9BYV9 841 aa18.22■□□□□ 0.51
TNRC6A-209ENST00000562829 PPEF2O14830 753 aa18.21■□□□□ 0.51
TNRC6A-209ENST00000562829 NFICP08651 508 aa18.21■□□□□ 0.51
TNRC6A-209ENST00000562829 OR4Q2P0C623 313 aa18.21■□□□□ 0.51
TNRC6A-209ENST00000562829 AARSP49588 968 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■■□□ 15.5
TNRC6A-209ENST00000562829 SNW1Q13573 536 aaKnown RBP18.21■□□□□ 0.51
TNRC6A-209ENST00000562829 ANGPT1Q15389 498 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms