RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 NOC3LQ8WTT2 800 aaKnown RBP16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 ASB7Q9H672 318 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 MAN1C1Q9NR34 630 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 EXOC1Q9NV70 894 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 DZANK1Q9NVP4 752 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 NUB1Q9Y5A7 615 aa16.69■□□□□ 0.26
CCNDBP1-203ENST00000562553 TSC2P49815 1807 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 DENND4AQ7Z401 1863 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 TGM5O43548 720 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 TRAPPC3O43617 180 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 EXTL3O43909 919 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 GLUD1P00367 558 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 SPATA31D3P0C874 917 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 SSTR3P32745 418 aaPredicted RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 MCM4P33991 863 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 ANP32AP39687 249 aaKnown RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 PLA2G5P39877 138 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 POU5F1Q01860 360 aaKnown RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 ZP2Q05996 745 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 DPYDQ12882 1025 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 BMT2Q1RMZ1 405 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 RSPO2Q6UXX9 243 aaPredicted RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 SPATA31D4Q6ZUB0 917 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 ADHFE1Q8IWW8 467 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 FMR1NBQ8N0W7 255 aaPredicted RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 BEST2Q8NFU1 509 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 FAM84AQ96KN4 292 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 AGPAT3Q9NRZ7 376 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 RBAKQ9NYW8 714 aaPredicted RBP16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 DERAQ9Y315 318 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 DOCK6Q96HP0 2047 aa16.68■□□□□ 0.26
CCNDBP1-203ENST00000562553 CLIC2O15247 247 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 RPN1P04843 607 aaKnown RBP16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 MYL1P05976 194 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 CREMQ03060 361 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 C9orf57Q5W0N0 161 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 TMC5Q6UXY8 1006 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 GPD1LQ8N335 351 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 ENGASEQ8NFI3 743 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 SFXN1Q9H9B4 322 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 HSPBP1Q9NZL4 362 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
CCNDBP1-203ENST00000562553 GOLGA6L4A6NEF3 574 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 SPDYE4A6NLX3 237 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 PRR33A8MZF0 331 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 TULP1O00294 542 aaPredicted RBP16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 IL18RAPO95256 599 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 AARSP49588 968 aaKnown RBP eCLIP16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 SNW1Q13573 536 aaKnown RBP16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 CBX2Q14781 532 aaPredicted RBP16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 LILRA6Q6PI73 481 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 CBWD2Q8IUF1 395 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 PDE11AQ9HCR9 933 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 HCN4Q9Y3Q4 1203 aa16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.66■□□□□ 0.26
CCNDBP1-203ENST00000562553 ANO9A1A5B4 782 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 PIRO00625 290 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 SYN3O14994 580 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 KIAA0391O15091 583 aaKnown RBP16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 SPTLC1O15269 473 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 RFPL2O75678 378 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 OR1D2P34982 312 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 CYP2J2P51589 502 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 ITIH3Q06033 890 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 PSMD2Q13200 908 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 KNOP1Q1ED39 458 aaKnown RBP16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 LMBRD2Q68DH5 695 aaPredicted RBP16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 SCARA3Q6AZY7 606 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 PDXDC1Q6P996 788 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 ANKS3Q6ZW76 656 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 KREMEN2Q8NCW0 462 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 FAM122AQ96E09 287 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 POMKQ9H5K3 350 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 DPP3Q9NY33 737 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 CHMP5Q9NZZ3 219 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 FBXW11Q9UKB1 542 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 TIMM13Q9Y5L4 95 aaPredicted RBP16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 BACE2Q9Y5Z0 518 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 CDY1Q9Y6F8 540 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 TRIOO75962 3097 aa16.65■□□□□ 0.26
CCNDBP1-203ENST00000562553 M0QZQ0 153 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 DCXO43602 365 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 TBC1D4O60343 1298 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 GADD45BO75293 160 aaPredicted RBP16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 RHOBTB3O94955 611 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 LILRA4P59901 499 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 TFAMQ00059 246 aaKnown RBP16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 FAM160A1Q05DH4 1040 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 PNOCQ13519 176 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 RAB33AQ14088 237 aa16.64■□□□□ 0.25
CCNDBP1-203ENST00000562553 MRPL58Q14197 206 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms