RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 RPF1Q9H9Y2 349 aaKnown RBP12.52□□□□□ -0.41
FANCA-209ENST00000562424 CPSF3Q9UKF6 684 aaKnown RBP12.52□□□□□ -0.41
FANCA-209ENST00000562424 EXOC7Q9UPT5 735 aa12.52□□□□□ -0.41
FANCA-209ENST00000562424 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
FANCA-209ENST00000562424 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.52□□□□□ -0.41
FANCA-209ENST00000562424 DOCK6Q96HP0 2047 aa12.52□□□□□ -0.41
FANCA-209ENST00000562424 LOC730098B7Z3J9 87 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 TRAPPC3O43617 180 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 MYBP10242 640 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
FANCA-209ENST00000562424 FGFR3P22607 806 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 MTHFRP42898 656 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 CASP5P51878 434 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 KCNA1Q09470 495 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 POSTNQ15063 836 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 ZBTB6Q15916 424 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 PSMD5Q16401 504 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 PDXDC1Q6P996 788 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 LILRA6Q6PI73 481 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 ELMSAN1Q6PJG2 1045 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
FANCA-209ENST00000562424 CHAMP1Q96JM3 812 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 SPATA32Q96LK8 384 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 RIPOR3Q96MK2 946 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 NECTIN4Q96NY8 510 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 C7orf25Q9BPX7 421 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 CLSTN3Q9BQT9 956 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 PYM1Q9BRP8 204 aaKnown RBP12.51□□□□□ -0.41
FANCA-209ENST00000562424 FGFBP2Q9BYJ0 223 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 IKZF4Q9H2S9 585 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 MAN1C1Q9NR34 630 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 DPP7Q9UHL4 492 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 CDH22Q9UJ99 828 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 AGO2Q9UKV8 859 aaKnown RBP12.51□□□□□ -0.41
FANCA-209ENST00000562424 KCNH3Q9ULD8 1083 aa12.51□□□□□ -0.41
FANCA-209ENST00000562424 SCN1AP35498 2009 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 LACTBL1A8MY62 500 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 TGM5O43548 720 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 CYP3A5P20815 502 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 CMA1P23946 247 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 ADSSP30520 456 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 LRPAP1P30533 357 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 BRCC3P46736 316 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 ACOT2P49753 483 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 EMP3P54852 163 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 ASIC1P78348 528 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 POU5F1Q01860 360 aaKnown RBP12.5□□□□□ -0.41
FANCA-209ENST00000562424 SPAG1Q07617 926 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 PALB2Q86YC2 1186 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 GLYCTKQ8IVS8 523 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 CD302Q8IX05 232 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 CMASQ8NFW8 434 aaPredicted RBP12.5□□□□□ -0.41
FANCA-209ENST00000562424 HDAC7Q8WUI4 952 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 POMGNT1Q8WZA1 660 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 PLEKHA4Q9H4M7 779 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 UBQLN1Q9UMX0 589 aaKnown RBP12.5□□□□□ -0.41
FANCA-209ENST00000562424 DOCK8Q8NF50 2099 aa12.5□□□□□ -0.41
FANCA-209ENST00000562424 TRIOO75962 3097 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 I3L4J1 428 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 XPOTO43592 962 aaKnown RBP12.49□□□□□ -0.41
FANCA-209ENST00000562424 PAPLNO95428 1278 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 WEE2P0C1S8 567 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 SLFN14P0C7P3 912 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 TKTP29401 623 aaKnown RBP12.49□□□□□ -0.41
FANCA-209ENST00000562424 MRE11P49959 708 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 NHLH1Q02575 133 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 EHHADHQ08426 723 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 ATAT1Q5SQI0 421 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 JADE1Q6IE81 842 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 CRELD2Q6UXH1 353 aaPredicted RBP12.49□□□□□ -0.41
FANCA-209ENST00000562424 TMC5Q6UXY8 1006 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 C15orf39Q6ZRI6 1047 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 GPR149Q86SP6 731 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 SYCP3Q8IZU3 236 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 RPGRIP1Q96KN7 1286 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 SUSD3Q96L08 255 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 RHOBTB2Q9BYZ6 727 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 SCAND2PQ9GZW5 306 aaPredicted RBP12.49□□□□□ -0.41
FANCA-209ENST00000562424 ASB7Q9H672 318 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 TMEM206Q9H813 350 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 MTRRQ9UBK8 725 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
FANCA-209ENST00000562424 SYN3O14994 580 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 EIF3DO15371 548 aaKnown RBP eCLIP12.48□□□□□ -0.411e-6■□□□□ 9.4
FANCA-209ENST00000562424 ADAM12O43184 909 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
FANCA-209ENST00000562424 PRPF6O94906 941 aaKnown RBP12.48□□□□□ -0.41
FANCA-209ENST00000562424 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 PFKFB1P16118 471 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 GARTP22102 1010 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 CASP1P29466 404 aa12.48□□□□□ -0.41
FANCA-209ENST00000562424 RAB33AQ14088 237 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms