RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 DNTTIP2Q5QJE6 756 aaKnown RBP15.33■□□□□ 0.04
COMMD4-205ENST00000562310 ALKAL1Q6UXT8 129 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 TTC39CQ8N584 583 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 ANKLE1Q8NAG6 615 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 SMG8Q8ND04 991 aaKnown RBP15.33■□□□□ 0.04
COMMD4-205ENST00000562310 SYT11Q9BT88 431 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 XYLT2Q9H1B5 865 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 AGO3Q9H9G7 860 aaKnown RBP15.33■□□□□ 0.04
COMMD4-205ENST00000562310 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.04
COMMD4-205ENST00000562310 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 PARP2Q9UGN5 583 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 SIX4Q9UIU6 781 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 CNTN6Q9UQ52 1028 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 NUB1Q9Y5A7 615 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 PCDHA13Q9Y5I0 950 aa15.33■□□□□ 0.04
COMMD4-205ENST00000562310 PITPNM1O00562 1244 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 KIF5CO60282 957 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 ZNF623O75123 536 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 SGPL1O95470 568 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 CST3P01034 146 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-205ENST00000562310 ITGA4P13612 1032 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 KRT5P13647 590 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 TNNT1P13805 278 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 SELPP16109 830 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 CYP3A5P20815 502 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 POLR2BP30876 1174 aaKnown RBP15.32■□□□□ 0.04
COMMD4-205ENST00000562310 MAGEA1P43355 309 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 GFPT1Q06210 699 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-205ENST00000562310 KIF5AQ12840 1032 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 MYO1EQ12965 1108 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 ZBTB6Q15916 424 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 SPOPLQ6IQ16 392 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 TRAF7Q6Q0C0 670 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 LRRC8DQ7L1W4 858 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 ZNF677Q86XU0 584 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 GPIHBP1Q8IV16 184 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 LRRC52Q8N7C0 313 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
COMMD4-205ENST00000562310 AGPAT1Q99943 283 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 ADAMTS1Q9UHI8 967 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 HES2Q9Y543 173 aa15.32■□□□□ 0.04
COMMD4-205ENST00000562310 A0A087X0T9 212 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ZNF263O14978 683 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 PJA2O43164 708 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 MYCP01106 439 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-205ENST00000562310 FAM228BP0C875 321 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ATF7P17544 494 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
COMMD4-205ENST00000562310 TNFAIP3P21580 790 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ARHGAP25P42331 645 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ETF1P62495 437 aaKnown RBP15.31■□□□□ 0.04
COMMD4-205ENST00000562310 CYP27A1Q02318 531 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 NAB2Q15742 525 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 MRPL10Q7Z7H8 261 aaKnown RBP15.31■□□□□ 0.04
COMMD4-205ENST00000562310 UBR7Q8N806 425 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 CXorf38Q8TB03 319 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 EPS8L1Q8TE68 723 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 PGBD4Q96DM1 585 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 HPDLQ96IR7 371 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ZNF560Q96MR9 790 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 ARID3AQ99856 593 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 BCO2Q9BYV7 579 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 CYP3A43Q9HB55 503 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 UBN1Q9NPG3 1134 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 LZTFL1Q9NQ48 299 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 SLC38A7Q9NVC3 462 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 NAGPAQ9UK23 515 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 NOCTQ9UK39 431 aaKnown RBP15.31■□□□□ 0.04
COMMD4-205ENST00000562310 INTUQ9ULD6 942 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 NENFQ9UMX5 172 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 AGAP1Q9UPQ3 857 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 GIT1Q9Y2X7 761 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 PCDHB4Q9Y5E5 795 aa15.31■□□□□ 0.04
COMMD4-205ENST00000562310 SMIM28A0A1B0GU29 152 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 DDX3XO00571 662 aaKnown RBP eCLIP15.3■□□□□ 0.04
COMMD4-205ENST00000562310 CYP26A1O43174 497 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 PARNO95453 639 aaKnown RBP15.3■□□□□ 0.04
COMMD4-205ENST00000562310 TFRCP02786 760 aaKnown RBP15.3■□□□□ 0.04
COMMD4-205ENST00000562310 CYP11B1P15538 503 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 AKAP5P24588 427 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 PNPLA4P41247 253 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 ASPAP45381 313 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 CDR2Q01850 454 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 CCDC122Q5T0U0 273 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 C1orf53Q5VUE5 145 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 ALKBH5Q6P6C2 394 aaKnown RBP15.3■□□□□ 0.04
COMMD4-205ENST00000562310 ANKRD33Q7Z3H0 272 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 RBBP8NLQ8NC74 664 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-205ENST00000562310 SLC30A5Q8TAD4 765 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 ZMAT2Q96NC0 199 aaKnown RBP15.3■□□□□ 0.04
COMMD4-205ENST00000562310 RPS6KC1Q96S38 1066 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 FTHL17Q9BXU8 183 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
COMMD4-205ENST00000562310 HTTP42858 3142 aa15.29■□□□□ 0.04
COMMD4-205ENST00000562310 A0A0U1RQF3 1178 aa15.29■□□□□ 0.04
COMMD4-205ENST00000562310 DCDC2CA8MYV0 355 aa15.29■□□□□ 0.04
COMMD4-205ENST00000562310 ZNF132P52740 706 aa15.29■□□□□ 0.04
COMMD4-205ENST00000562310 LBX1P52954 281 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms