RNA–Protein interactions for RNA: ENST00000561954.1

IFT140-205, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 826 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-205ENST00000561954 CACNG4Q9UBN1 327 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 IRAK3Q9Y616 596 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 PLXNA4Q9HCM2 1894 aa15.12■□□□□ 0.01
IFT140-205ENST00000561954 ANO9A1A5B4 782 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 TRIM49BA6NDI0 452 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 F8W810 466 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 SYN3O14994 580 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 CSPG5O95196 566 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 LETM1O95202 739 aaPredicted RBP15.11■□□□□ 0.01
IFT140-205ENST00000561954 GNA14O95837 355 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 EFEMP2O95967 443 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 ITGB3P05106 788 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 ERCC5P28715 1186 aaPredicted RBP15.11■□□□□ 0.01
IFT140-205ENST00000561954 CASP4P49662 377 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 TAF6P49848 677 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 PMS1P54277 932 aaKnown RBP15.11■□□□□ 0.01
IFT140-205ENST00000561954 WNT7BP56706 349 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 DSG1Q02413 1049 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 DPCR1Q3MIW9 517 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 MICALL1Q8N3F8 863 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 CSGALNACT2Q8N6G5 542 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 C1orf127Q8N9H9 656 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 C3orf58Q8NDZ4 430 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 PARD3BQ8TEW8 1205 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 RABGGTAQ92696 567 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 TTPALQ9BTX7 342 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 VN1R3Q9BXE9 311 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 EMILIN2Q9BXX0 1053 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
IFT140-205ENST00000561954 ANO10Q9NW15 660 aa15.11■□□□□ 0.01
IFT140-205ENST00000561954 ANK1P16157 1881 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 LRRIQ3A6PVS8 624 aaPredicted RBP15.1■□□□□ 0.01
IFT140-205ENST00000561954 IKBKBO14920 756 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 NCK2O43639 380 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 SRGAP2BP0DMP2 458 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 ODC1P11926 461 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 POLR2BP30876 1174 aaKnown RBP15.1■□□□□ 0.01
IFT140-205ENST00000561954 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
IFT140-205ENST00000561954 VAMP7P51809 220 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 GUCY2FP51841 1108 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 ERVFC1P60507 584 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 CLDN10P78369 228 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 RBP5P82980 135 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 MYO1EQ12965 1108 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 CAMK1Q14012 370 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 PTPN14Q15678 1187 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 FAM171A1Q5VUB5 890 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 APPL2Q8NEU8 664 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 SUSD3Q96L08 255 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 GPR62Q9BZJ7 368 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 TMEM63CQ9P1W3 806 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 ARMCX3Q9UH62 379 aaPredicted RBP15.1■□□□□ 0.01
IFT140-205ENST00000561954 PTPRJQ12913 1337 aa15.1■□□□□ 0.01
IFT140-205ENST00000561954 PIRO00625 290 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 KRT19P08727 400 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 FGFR3P22607 806 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 GTF2H1P32780 548 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 IRS1P35568 1242 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 BIRC3Q13489 604 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 TPD52L1Q16890 204 aaPredicted RBP15.09■□□□□ 0.01
IFT140-205ENST00000561954 CCDC40Q4G0X9 1142 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 LMBRD2Q68DH5 695 aaPredicted RBP15.09■□□□□ 0.01
IFT140-205ENST00000561954 ANKS3Q6ZW76 656 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 TRAPPC11Q7Z392 1133 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 MRPL43Q8N983 215 aaKnown RBP15.09■□□□□ 0.01
IFT140-205ENST00000561954 OR5B17Q8NGF7 314 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 MAFAQ8NHW3 353 aaPredicted RBP15.09■□□□□ 0.01
IFT140-205ENST00000561954 PIK3R5Q8WYR1 880 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 OXCT2Q9BYC2 517 aaPredicted RBP15.09■□□□□ 0.01
IFT140-205ENST00000561954 DSEQ9UL01 958 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 PCDHB8Q9UN66 801 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 AGAP1Q9UPQ3 857 aa15.09■□□□□ 0.01
IFT140-205ENST00000561954 C2orf71A6NGG8 1288 aa15.08■□□□□ 0
IFT140-205ENST00000561954 H7C4K7 107 aa15.08■□□□□ 0
IFT140-205ENST00000561954 M0QZQ0 153 aa15.08■□□□□ 0
IFT140-205ENST00000561954 PHACTR2O75167 634 aa15.08■□□□□ 0
IFT140-205ENST00000561954 CXCL14O95715 111 aa15.08■□□□□ 0
IFT140-205ENST00000561954 ADH1AP07327 375 aa15.08■□□□□ 0
IFT140-205ENST00000561954 CCDC192P0DO97 292 aa15.08■□□□□ 0
IFT140-205ENST00000561954 BRCC3P46736 316 aa15.08■□□□□ 0
IFT140-205ENST00000561954 NDUFV1P49821 464 aa15.08■□□□□ 0
IFT140-205ENST00000561954 STX17P56962 302 aa15.08■□□□□ 0
IFT140-205ENST00000561954 LILRA4P59901 499 aa15.08■□□□□ 0
IFT140-205ENST00000561954 TRPC3Q13507 836 aa15.08■□□□□ 0
IFT140-205ENST00000561954 TCEAL5Q5H9L2 206 aa15.08■□□□□ 0
IFT140-205ENST00000561954 DCAF17Q5H9S7 520 aaPredicted RBP15.08■□□□□ 0
IFT140-205ENST00000561954 ZNF280DQ6N043 979 aa15.08■□□□□ 0
IFT140-205ENST00000561954 ELMSAN1Q6PJG2 1045 aa15.08■□□□□ 0
IFT140-205ENST00000561954 DSTYKQ6XUX3 929 aa15.08■□□□□ 0
IFT140-205ENST00000561954 FRMD5Q7Z6J6 570 aa15.08■□□□□ 0
IFT140-205ENST00000561954 FILIP1Q7Z7B0 1213 aa15.08■□□□□ 0
IFT140-205ENST00000561954 PPFIBP1Q86W92 1011 aa15.08■□□□□ 0
IFT140-205ENST00000561954 CEP57Q86XR8 500 aa15.08■□□□□ 0
IFT140-205ENST00000561954 FAM114A1Q8IWE2 563 aa15.08■□□□□ 0
IFT140-205ENST00000561954 RIN2Q8WYP3 895 aaPredicted RBP15.08■□□□□ 0
IFT140-205ENST00000561954 DUSP9Q99956 384 aaKnown RBP15.08■□□□□ 0
IFT140-205ENST00000561954 IMPG2Q9BZV3 1241 aa15.08■□□□□ 0
IFT140-205ENST00000561954 NAT10Q9H0A0 1025 aaKnown RBP15.08■□□□□ 0
IFT140-205ENST00000561954 GZF1Q9H116 711 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms