RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 SPECC1LQ69YQ0 1117 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 LRRC43Q8N309 656 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 TAF4BQ92750 862 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 ZNF689Q96CS4 500 aaPredicted RBP13.63□□□□□ -0.23
CMTM4-203ENST00000561680 ZNF560Q96MR9 790 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 UROC1Q96N76 676 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 PI4K2AQ9BTU6 479 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 IMPG2Q9BZV3 1241 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 GANQ9H2C0 597 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 VRTNQ9H8Y1 702 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 AGAP1Q9UPQ3 857 aa13.63□□□□□ -0.23
CMTM4-203ENST00000561680 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 CASTOR2A6NHX0 329 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 PPEF2O14830 753 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 EPHB6O15197 1021 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 NOL4O94818 638 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 DDHD2O94830 711 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 GJB5O95377 273 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 RFX1P22670 979 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 ATICP31939 592 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 APBA1Q02410 837 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 RNASELQ05823 741 aaKnown RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 ZNF699Q32M78 642 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 FIGNQ5HY92 759 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 KLHDC7AQ5VTJ3 777 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 TMC6Q7Z403 805 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 ZNF280BQ86YH2 543 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 COLGALT2Q8IYK4 626 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 CMTR2Q8IYT2 770 aaKnown RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 NEK11Q8NG66 645 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 ANP32BQ92688 251 aaKnown RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 IQCDQ96DY2 449 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 PCMTD1Q96MG8 357 aaPredicted RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 NT5C1BQ96P26 610 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 TTYH3Q9C0H2 523 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 APOBEC3GQ9HC16 384 aaKnown RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 FAM207AQ9NSI2 230 aaPredicted RBP13.62□□□□□ -0.23
CMTM4-203ENST00000561680 CACNG4Q9UBN1 327 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 APEX2Q9UBZ4 518 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 FBXL5Q9UKA1 691 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 DAAM1Q9Y4D1 1078 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
CMTM4-203ENST00000561680 PODXLO00592 558 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 GYPCP04921 128 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 TRIM21P19474 475 aaKnown RBP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 PNPLA4P41247 253 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 CLCNKBP51801 687 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 TBX2Q13207 712 aaPredicted RBP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 TRIM14Q14142 442 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 UPP1Q16831 310 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 PAN2Q504Q3 1202 aaKnown RBP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 WDR44Q5JSH3 913 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 SPOPLQ6IQ16 392 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 FAM117BQ6P1L5 589 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 ARHGEF19Q8IW93 802 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 CCDC150Q8NCX0 1101 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 PHOSPHO2Q8TCD6 241 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 ELMO3Q96BJ8 720 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 HPDLQ96IR7 371 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 PDLIM2Q96JY6 352 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 FAM193BQ96PV7 902 aaPredicted RBP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 PAAF1Q9BRP4 392 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 NUP58Q9BVL2 599 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 NRDE2Q9H7Z3 1164 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 CEP72Q9P209 647 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 R3HCC1Q9Y3T6 440 aaKnown RBP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.61□□□□□ -0.23
CMTM4-203ENST00000561680 FHOD1Q9Y613 1164 aa13.61□□□□□ -0.23
CMTM4-203ENST00000561680 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
CMTM4-203ENST00000561680 PATJQ8NI35 1801 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 A0A1W2PQJ5 194 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 TMEM189-UBE2V1I3L0A0 370 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 UCHL3P15374 230 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
CMTM4-203ENST00000561680 TAF6P49848 677 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 GCNT1Q02742 428 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 LRMPQ12912 555 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 MYO1EQ12965 1108 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 SV2CQ496J9 727 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 C9orf50Q5SZB4 431 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 GJB7Q6PEY0 223 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 HERC6Q8IVU3 1022 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 C3orf58Q8NDZ4 430 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 TATDN2Q93075 761 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 FAXDC2Q96IV6 333 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 FAM81BQ96LP2 452 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 YME1L1Q96TA2 773 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 GDF15Q99988 308 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 TMEM175Q9BSA9 504 aa13.6□□□□□ -0.23
CMTM4-203ENST00000561680 NAA15Q9BXJ9 866 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms