RNA–Protein interactions for RNA: ENST00000561609.5

PKM-205, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 1,568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-205ENST00000561609 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 TAS2R14Q9NYV8 317 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 NCANO14594 1321 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 BUB1O43683 1085 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 SLU7O95391 586 aaKnown RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 CHRNA1P02708 482 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 ITGB3P05106 788 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 GZMAP12544 262 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 ATICP31939 592 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 ZNF132P52740 706 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 YARSP54577 528 aaKnown RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 AMPD2Q01433 879 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PTK7Q13308 1070 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 ZBTB6Q15916 424 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 TAF3Q5VWG9 929 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 TRIM6Q9C030 488 aaPredicted RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 NXF3Q9H4D5 531 aaKnown RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 SEPT11Q9NVA2 429 aaKnown RBP12.13□□□□□ -0.47
PKM-205ENST00000561609 CNTN3Q9P232 1028 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 ITGA11Q9UKX5 1188 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 JRKLQ9Y4A0 524 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PCDHB4Q9Y5E5 795 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PCDHGC5Q9Y5F6 944 aa12.13□□□□□ -0.47
PKM-205ENST00000561609 PDCD11Q14690 1871 aaKnown RBP12.12□□□□□ -0.47
PKM-205ENST00000561609 ANKRD62A6NC57 917 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 TMCO5BA8MYB1 307 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
PKM-205ENST00000561609 RTN2O75298 545 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 RPS6KA5O75582 802 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 RECQL4O94761 1208 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 ATP1A1P05023 1023 aaKnown RBP12.12□□□□□ -0.47
PKM-205ENST00000561609 KRT19P08727 400 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 ASPAP45381 313 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 XKR4Q5GH76 650 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 RBBP8NLQ8NC74 664 aaPredicted RBP12.12□□□□□ -0.47
PKM-205ENST00000561609 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 TSPAN18Q96SJ8 248 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 CXCL16Q9H2A7 254 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 DPP3Q9NY33 737 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 CDC23Q9UJX2 597 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 HES2Q9Y543 173 aa12.12□□□□□ -0.47
PKM-205ENST00000561609 ENC1O14682 589 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 CLSTN1O94985 981 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 CTSHP09668 335 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 YWHAEP62258 255 aaKnown RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 RBP5P82980 135 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 IFI16Q16666 785 aaKnown RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 TRIM71Q2Q1W2 868 aaKnown RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 FAM26DQ5JW98 314 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 TMEM130Q8N3G9 435 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 SLC43A3Q8NBI5 491 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 SMG8Q8ND04 991 aaKnown RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 CTNNBL1Q8WYA6 563 aaPredicted RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 GLT1D1Q96MS3 346 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 ZMAT2Q96NC0 199 aaKnown RBP12.11□□□□□ -0.47
PKM-205ENST00000561609 CHST12Q9NRB3 414 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 CISHQ9NSE2 258 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 POLIQ9UNA4 740 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 ST3GAL5Q9UNP4 418 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 AGAP1Q9UPQ3 857 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 IPPQ9Y573 584 aa12.11□□□□□ -0.47
PKM-205ENST00000561609 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
PKM-205ENST00000561609 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 GRID2IPA4D2P6 1211 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 PALMO75781 387 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 CALCAP01258 141 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 KCNE1P15382 129 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 GNA15P30679 374 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 THPOP40225 353 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 GUCY2FP51841 1108 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 NAP1L1P55209 391 aaKnown RBP12.1□□□□□ -0.47
PKM-205ENST00000561609 TCEAL1Q15170 157 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 TWF2Q6IBS0 349 aaKnown RBP12.1□□□□□ -0.47
PKM-205ENST00000561609 ACAD10Q6JQN1 1059 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 ARRDC4Q8NCT1 418 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 RFFLQ8WZ73 363 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.1□□□□□ -0.474e-6■■■□□ 19.2
PKM-205ENST00000561609 THAP2Q9H0W7 228 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 TRMT13Q9NUP7 481 aaKnown RBP12.1□□□□□ -0.47
PKM-205ENST00000561609 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
PKM-205ENST00000561609 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 TRIP11Q15643 1979 aa12.1□□□□□ -0.47
PKM-205ENST00000561609 GPR182O15218 404 aa12.09□□□□□ -0.47
PKM-205ENST00000561609 CAND2O75155 1236 aa12.09□□□□□ -0.47
PKM-205ENST00000561609 CYP1A1P04798 512 aaPredicted RBP12.09□□□□□ -0.47
PKM-205ENST00000561609 WEE2P0C1S8 567 aa12.09□□□□□ -0.47
PKM-205ENST00000561609 UNGP13051 313 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms