RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 DDX12PQ92771 950 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 CALML4Q96GE6 196 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 PLA2G2FQ9BZM2 168 aa29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 LARSQ9P2J5 1176 aaKnown RBP29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 DAXXQ9UER7 740 aaPredicted RBP29.49■■■□□ 2.31
SNRPA1-215ENST00000561187 MIA3Q5JRA6 1907 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 ARHGEF37A1IGU5 675 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 HNRNPDLO14979 420 aaKnown RBP29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 TBC1D4O60343 1298 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 FAM13AO94988 1023 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 ATF2P15336 505 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 PLCG1P19174 1290 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 UBA7P41226 1012 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 ADCY1Q08828 1119 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 MCM6Q14566 821 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 KARSQ15046 597 aaKnown RBP29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 ADSSL1Q8N142 457 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 MYCT1Q8N699 235 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 KCNG4Q8TDN1 519 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 KCND2Q9NZV8 630 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 DLGAP2Q9P1A6 1054 aa29.48■■■□□ 2.31
SNRPA1-215ENST00000561187 SPTBN4Q9H254 2564 aa29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 KRT18P05783 430 aaKnown RBP29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 OR4Q2P0C623 313 aa29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 PTPN2P17706 415 aa29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 PPP2R3AQ06190 1150 aa29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 MRPL58Q14197 206 aaKnown RBP29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 FAM212AQ96EL1 285 aa29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 MTF2Q9Y483 593 aaPredicted RBP29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 GVINP1Q7Z2Y8 2422 aa29.47■■■□□ 2.31
SNRPA1-215ENST00000561187 CLTAP09496 248 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 MARCKSP29966 332 aaPredicted RBP29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 CCR2P41597 374 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 STARD6P59095 220 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 TWF1Q12792 350 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 GRM2Q14416 872 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 SLC44A4Q53GD3 710 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 TCEAL8Q8IYN2 117 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 HS6ST3Q8IZP7 471 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 APPL2Q8NEU8 664 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 SHDQ96IW2 340 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 PGLYRP2Q96PD5 576 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 BLOC1S4Q9NUP1 217 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 PCDHB8Q9UN66 801 aa29.46■■■□□ 2.31
SNRPA1-215ENST00000561187 CACNA1IQ9P0X4 2223 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 VPS37CA5D8V6 355 aaPredicted RBP29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 LACTBL1A8MY62 500 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 PPEF2O14830 753 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 GJA1P17302 382 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 PRSS36Q5K4E3 855 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 TANGO2Q6ICL3 276 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 RNF19BQ6ZMZ0 732 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 PDZD4Q76G19 769 aaPredicted RBP29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 RTL10Q7L3V2 364 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 AK8Q96MA6 479 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 KCNG1Q9UIX4 513 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 ODF2LQ9ULJ1 636 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 TBX20Q9UMR3 447 aa29.45■■■□□ 2.31
SNRPA1-215ENST00000561187 WDR87Q6ZQQ6 2873 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 KANSL1LA0AUZ9 987 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 TTC26A0AVF1 554 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 H0YCG3 227 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 ENOX2Q16206 610 aaKnown RBP29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 TPRG1Q6ZUI0 275 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 C1orf210Q8IVY1 113 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 GDE1Q9NZC3 331 aa29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 UBQLN1Q9UMX0 589 aaKnown RBP29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.44■■■□□ 2.3
SNRPA1-215ENST00000561187 EP300Q09472 2414 aaPredicted RBP29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 MYL4P12829 197 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 YWHAHQ04917 246 aaPredicted RBP29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 SF3A1Q15459 793 aaKnown RBP29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 TPGS2Q68CL5 300 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 ELMOD1Q8N336 334 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 KCTD17Q8N5Z5 321 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 RAD54LQ92698 747 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 MSTO1Q9BUK6 570 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 RPF1Q9H9Y2 349 aaKnown RBP29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 PARVGQ9HBI0 331 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 CEP72Q9P209 647 aa29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 AFF4Q9UHB7 1163 aaKnown RBP29.43■■■□□ 2.3
SNRPA1-215ENST00000561187 TBCAO75347 108 aaKnown RBP29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 ECI2O75521 394 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 NMT1P30419 496 aaKnown RBP29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 MCM2P49736 904 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 CDR1P51861 262 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 PFKPQ01813 784 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 DSTYKQ6XUX3 929 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 PLEKHA5Q9HAU0 1116 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 HEBP1Q9NRV9 189 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 SPATA6Q9NWH7 488 aaPredicted RBP29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 YIPF1Q9Y548 306 aa29.42■■■□□ 2.3
SNRPA1-215ENST00000561187 FAM170BA6NMN3 283 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 TISP43B9A030 160 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 TRAK2O60296 914 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 SP9P0CG40 484 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 FCARP24071 287 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 LRPAP1P30533 357 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 PRKCQQ04759 706 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 FAM78AQ5JUQ0 283 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms