RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 RESP18Q5W5W9 173 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 GET4Q7L5D6 327 aaPredicted RBP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 GRASPQ7Z6J2 395 aaPredicted RBP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 TMEM209Q96SK2 561 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 PRKD2Q9BZL6 878 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 BLZF1Q9H2G9 400 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 RPF1Q9H9Y2 349 aaKnown RBP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 ZDHHC7Q9NXF8 308 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 SEL1LQ9UBV2 794 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 FBXL5Q9UKA1 691 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 AGO2Q9UKV8 859 aaKnown RBP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 NR2E1Q9Y466 385 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 BACE2Q9Y5Z0 518 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 POLR2DO15514 142 aaKnown RBP13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 NARSO43776 548 aaKnown RBP13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 GAP43P17677 238 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 RPL9P32969 192 aaKnown RBP13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 VCPP55072 806 aaKnown RBP13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 ARPP19P56211 112 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 CREMQ03060 361 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 EHHADHQ08426 723 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 SPATA1Q5VX52 437 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 ADALQ6DHV7 355 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 SLC8B1Q6J4K2 584 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 TTC9BQ8N6N2 239 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 ITFG1Q8TB96 612 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 HVCN1Q96D96 273 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 TNMDQ9H2S6 317 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 CRISPLD1Q9H336 500 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 PLEKHA4Q9H4M7 779 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 UBQLN1Q9UMX0 589 aaKnown RBP13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 NUB1Q9Y5A7 615 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 ZNF318Q5VUA4 2279 aa13.76□□□□□ -0.21
CHRNA3-208ENST00000561128 ANO9A1A5B4 782 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 ACTN4O43707 911 aaKnown RBP13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 ME1P48163 572 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 ASIC1P78348 528 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 CUL4BQ13620 913 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 SLC5A9Q2M3M2 681 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 C9orf57Q5W0N0 161 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 ANKS3Q6ZW76 656 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 KCNG4Q8TDN1 519 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 HDAC7Q8WUI4 952 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 LEO1Q8WVC0 666 aaPredicted RBP13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 POMGNT1Q8WZA1 660 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 ACCSQ96QU6 501 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 FAM213AQ9BRX8 229 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 RHOBTB2Q9BYZ6 727 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 PCIF1Q9H4Z3 704 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 DNMT3BQ9UBC3 853 aaKnown RBP13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 KCNG1Q9UIX4 513 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 RCOR1Q9UKL0 485 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 PCDHB8Q9UN66 801 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 SORCS3Q9UPU3 1222 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 USTQ9Y2C2 406 aa13.75□□□□□ -0.21
CHRNA3-208ENST00000561128 M0QZQ0 153 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 SYN3O14994 580 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 ABLIM3O94929 683 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 AFMP43652 599 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 SIGLEC14Q08ET2 396 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 TMEM132DQ14C87 1099 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 CTXN3Q4LDR2 81 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 PPM1LQ5SGD2 360 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 IER5LQ5T953 404 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 LIN9Q5TKA1 542 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 LMBRD2Q68DH5 695 aaPredicted RBP13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 RNF19BQ6ZMZ0 732 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 EPM2AIP1Q7L775 607 aaPredicted RBP13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 BRSK2Q8IWQ3 736 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 OR10T2Q8NGX3 314 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 CXorf38Q8TB03 319 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 ING5Q8WYH8 240 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 RPP25Q9BUL9 199 aaKnown RBP13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 GOLPH3LQ9H4A5 285 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 PIDD1Q9HB75 910 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 GDPD2Q9HCC8 539 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
CHRNA3-208ENST00000561128 MYO10Q9HD67 2058 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 NCANO14594 1321 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 TCHHQ07283 1943 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 PIRO00625 290 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 TGFB1I1O43294 461 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 TRAPPC3O43617 180 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 KLRC4O43908 158 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 C1RP00736 705 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 PRR29P0C7W0 189 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 PFKFB1P16118 471 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 CYP3A5P20815 502 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 SCP2P22307 547 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 HOXA9P31269 272 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 GBP2P32456 591 aaPredicted RBP13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 CCR2P41597 374 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 CCDC142Q17RM4 750 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 CNNM4Q6P4Q7 775 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 OTOP3Q7RTS5 596 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 CCDC65Q8IXS2 484 aa13.73□□□□□ -0.21
CHRNA3-208ENST00000561128 BORCS6Q96GS4 357 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms