RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SEC24AO95486 1093 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 RPA1P27694 616 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 GRM5P41594 1212 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 LRRC32Q14392 662 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 GAS6Q14393 721 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 IFT74Q96LB3 600 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 C8orf33Q9H7E9 229 aaPredicted RBP20.35■□□□□ 0.85
TPM1-226ENST00000560959 GOLGA2P5Q9HBQ8 144 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 AFF4Q9UHB7 1163 aaKnown RBP20.35■□□□□ 0.85
TPM1-226ENST00000560959 FBXL5Q9UKA1 691 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 ARHGEF35A5YM69 484 aa20.34■□□□□ 0.85
TPM1-226ENST00000560959 PODXLO00592 558 aa20.34■□□□□ 0.85
TPM1-226ENST00000560959 FDPSP14324 419 aaKnown RBP20.34■□□□□ 0.85
TPM1-226ENST00000560959 KCNE1P15382 129 aa20.34■□□□□ 0.85
TPM1-226ENST00000560959 CCNE1P24864 410 aa20.34■□□□□ 0.85
TPM1-226ENST00000560959 SOX4Q06945 474 aaPredicted RBP20.34■□□□□ 0.85
TPM1-226ENST00000560959 KIFAP3Q92845 792 aa20.34■□□□□ 0.85
TPM1-226ENST00000560959 CCDC94Q9BW85 323 aaPredicted RBP20.34■□□□□ 0.85
TPM1-226ENST00000560959 TPCN1Q9ULQ1 816 aa20.34■□□□□ 0.85
TPM1-226ENST00000560959 CHD8Q9HCK8 2581 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 BTBD18B2RXH4 712 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 K7ERI5 159 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 K7ESF4 209 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 CHADO15335 359 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 LIG1P18858 919 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 VIPR2P41587 438 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 LIMK1P53667 647 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 ARPP19P56211 112 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 DGKKQ5KSL6 1271 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.33■□□□□ 0.85
TPM1-226ENST00000560959 ERMNQ8TAM6 284 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 ZSCAN18Q8TBC5 510 aaPredicted RBP20.33■□□□□ 0.85
TPM1-226ENST00000560959 CSGALNACT1Q8TDX6 532 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 SUSD3Q96L08 255 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 PTPRHQ9HD43 1115 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 ASAH2Q9NR71 780 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 CEP72Q9P209 647 aa20.33■□□□□ 0.85
TPM1-226ENST00000560959 MAP1BP46821 2468 aaKnown RBP20.33■□□□□ 0.84
TPM1-226ENST00000560959 HEPACAM2A8MVW5 462 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 CHURC1-FNTBB4DL54 471 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 WNT7AO00755 349 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 FNTBP49356 437 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 FCHO2Q0JRZ9 810 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 CTXN3Q4LDR2 81 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 HS6ST3Q8IZP7 471 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 SYNPOQ8N3V7 929 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 APPL2Q8NEU8 664 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 OXCT2Q9BYC2 517 aaPredicted RBP20.32■□□□□ 0.84
TPM1-226ENST00000560959 TMEM60Q9H2L4 133 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 NUB1Q9Y5A7 615 aa20.32■□□□□ 0.84
TPM1-226ENST00000560959 PHLPP2Q6ZVD8 1323 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 COL4A2P08572 1712 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 TWF1Q12792 350 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 ZNF280DQ6N043 979 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 RALGPS2Q86X27 583 aaPredicted RBP20.31■□□□□ 0.84
TPM1-226ENST00000560959 BEST2Q8NFU1 509 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 LOXL4Q96JB6 756 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 ZMAT2Q96NC0 199 aaKnown RBP20.31■□□□□ 0.84
TPM1-226ENST00000560959 ACO2Q99798 780 aaKnown RBP20.31■□□□□ 0.84
TPM1-226ENST00000560959 TMEM134Q9H6X4 195 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 CNTN3Q9P232 1028 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 ANGPTL2Q9UKU9 493 aa20.31■□□□□ 0.84
TPM1-226ENST00000560959 MYBPHLA2RUH7 354 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 TM4SF5O14894 197 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 GDF9O60383 454 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 MYL4P12829 197 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 PMLP29590 882 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 SHC2P98077 582 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 DMWDQ09019 674 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 IL31Q6EBC2 164 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 WDR5BQ86VZ2 330 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 YAF2Q8IY57 180 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 DIS3L2Q8IYB7 885 aaKnown RBP20.3■□□□□ 0.84
TPM1-226ENST00000560959 ACAP3Q96P50 834 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 KIFC3Q9BVG8 833 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 CDT1Q9H211 546 aa20.3■□□□□ 0.84
TPM1-226ENST00000560959 MCF2P10911 925 aa20.29■□□□□ 0.84
TPM1-226ENST00000560959 KPNA1P52294 538 aaPredicted RBP20.29■□□□□ 0.84
TPM1-226ENST00000560959 ORC2Q13416 577 aaPredicted RBP20.29■□□□□ 0.84
TPM1-226ENST00000560959 TEAD2Q15562 447 aa20.29■□□□□ 0.84
TPM1-226ENST00000560959 FAM160A2Q8N612 972 aaPredicted RBP20.29■□□□□ 0.84
TPM1-226ENST00000560959 CEP120Q8N960 986 aa20.29■□□□□ 0.84
TPM1-226ENST00000560959 SHKBP1Q8TBC3 707 aa20.29■□□□□ 0.84
TPM1-226ENST00000560959 DDX12PQ92771 950 aa20.29■□□□□ 0.84
TPM1-226ENST00000560959 MRPL4Q9BYD3 311 aaKnown RBP20.29■□□□□ 0.84
TPM1-226ENST00000560959 OBP2AQ9NY56 170 aa20.29■□□□□ 0.84
TPM1-226ENST00000560959 USP24Q9UPU5 2620 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 CHD6Q8TD26 2715 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 CCDC163A0A0D9SF12 145 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 MCM7P33993 719 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 PLD1Q13393 1074 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 HAUS3Q68CZ6 603 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 TBC1D32Q96NH3 1257 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 LRRC3Q9BY71 257 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 PCDHB8Q9UN66 801 aa20.28■□□□□ 0.84
TPM1-226ENST00000560959 RBM19Q9Y4C8 960 aaKnown RBP20.28■□□□□ 0.84
TPM1-226ENST00000560959 NCANO14594 1321 aa20.27■□□□□ 0.84
TPM1-226ENST00000560959 SPECC1L-ADORA2AF8WAN1 911 aa20.27■□□□□ 0.84
TPM1-226ENST00000560959 DTNBO60941 627 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms