RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 C15orf39Q6ZRI6 1047 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 ANKS3Q6ZW76 656 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 EFCAB13Q8IY85 973 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 SYCP3Q8IZU3 236 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 HDAC7Q8WUI4 952 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 SMG7Q92540 1137 aaKnown RBP12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 LRFN3Q9BTN0 628 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 PCIF1Q9H4Z3 704 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 EXOC7Q9UPT5 735 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 TIMM13Q9Y5L4 95 aaPredicted RBP12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
RABGGTA-216ENST00000560243 SYN3O14994 580 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 SPTLC1O15269 473 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 N4BP1O75113 896 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 ZMYND10O75800 440 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 PAPLNO95428 1278 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 C1RP00736 705 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 ASGR2P07307 311 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 CYP3A5P20815 502 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 CMA1P23946 247 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 ARPP19P56211 112 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 EHHADHQ08426 723 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 ALCAMQ13740 583 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 MRPL58Q14197 206 aaKnown RBP12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 BECN1Q14457 450 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 TMEM132DQ14C87 1099 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 POSTNQ15063 836 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 TMEM31Q5JXX7 168 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 FAM26FQ5R3K3 315 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 SCARA3Q6AZY7 606 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 EPM2AIP1Q7L775 607 aaPredicted RBP12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 LRRC27Q9C0I9 530 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 SMOC2Q9H3U7 446 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 FBXL5Q9UKA1 691 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 ZDBF2Q9HCK1 2354 aa12.64□□□□□ -0.39
RABGGTA-216ENST00000560243 NOTCH4Q99466 2003 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 WDR27A2RRH5 827 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 M0QZQ0 153 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 TULP1O00294 542 aaPredicted RBP12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 GPR37L1O60883 481 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 C8AP07357 584 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 SLFN14P0C7P3 912 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 AARSP49588 968 aaKnown RBP eCLIP12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 NDUFA8P51970 172 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 NTHL1P78549 312 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 ROR1Q01973 937 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 CTXN3Q4LDR2 81 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 LIN9Q5TKA1 542 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 C9orf57Q5W0N0 161 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 SLC8B1Q6J4K2 584 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 ELMSAN1Q6PJG2 1045 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 CCDC149Q6ZUS6 474 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 UNC13DQ70J99 1090 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 CD302Q8IX05 232 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 TDRD5Q8NAT2 981 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 BEST2Q8NFU1 509 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 SLC7A14Q8TBB6 771 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 NOC3LQ8WTT2 800 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 SCFD1Q8WVM8 642 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 PAGE5Q96GU1 130 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 ASB7Q9H672 318 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 PIDD1Q9HB75 910 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 WDR6Q9NNW5 1121 aaKnown RBP12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 ZDHHC7Q9NXF8 308 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 LIMD1Q9UGP4 676 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 DPP7Q9UHL4 492 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 PCDHB8Q9UN66 801 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 HPSEQ9Y251 543 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 DERAQ9Y315 318 aa12.63□□□□□ -0.39
RABGGTA-216ENST00000560243 CLUHO75153 1309 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 PIRO00625 290 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 CCL16O15467 120 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 TGFB1I1O43294 461 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 KLRC4O43908 158 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 EXTL3O43909 919 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 SEC24AO95486 1093 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 GARTP22102 1010 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 LILRA4P59901 499 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 ZXDAP98168 799 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 PTPN21Q16825 1174 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 PPM1LQ5SGD2 360 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 BRSK2Q8IWQ3 736 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 NELFCDQ8IXH7 590 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 CEP57L1Q8IYX8 460 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 ZDHHC14Q8IZN3 488 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 ZNF507Q8TCN5 953 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 EDAQ92838 391 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 MYADMQ96S97 322 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 RHOBTB2Q9BYZ6 727 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 TMEM206Q9H813 350 aa12.62□□□□□ -0.39
RABGGTA-216ENST00000560243 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms