RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 C9orf72Q96LT7 481 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 CYTH2Q99418 400 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 RANBP17Q9H2T7 1088 aaKnown RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 USP29Q9HBJ7 922 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 SSU72Q9NP77 194 aaKnown RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 DDX18Q9NVP1 670 aaKnown RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 SUGT1Q9Y2Z0 365 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 ZNF711Q9Y462 761 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 KDM3AQ9Y4C1 1321 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 ARHGAP10A1A4S6 786 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 CCDC160A6NGH7 325 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 POTECB2RU33 542 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 SPOPO43791 374 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 TYROBPO43914 113 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 AKAP3O75969 853 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 FTLP02792 175 aaPredicted RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 KRT18P05783 430 aaKnown RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PLA2G4BP0C869 781 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 FGFR1P11362 822 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PIK3CAP42336 1068 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 NT5C2P49902 561 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 TFAP4Q01664 338 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 OVGP1Q12889 678 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 ECM1Q16610 540 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 MMEL1Q495T6 779 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PRUNE1Q86TP1 453 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 CROCCP3Q8IVE0 287 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 C4orf33Q8N1A6 199 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 LARGE2Q8N3Y3 721 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 FNDC8Q8TC99 324 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 FAM172AQ8WUF8 416 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PWWP2AQ96N64 755 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PANX3Q96QZ0 392 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 AGPAT1Q99943 283 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 KLHL4Q9C0H6 718 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 UNC45AQ9H3U1 944 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PPCSQ9HAB8 311 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.03□□□□□ -1.286e-7■■■■■ 162.5
ZEB1-217ENST00000559858 ARHGEF38Q9NXL2 777 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 SUN2Q9UH99 717 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 TRMT112Q9UI30 125 aaKnown RBP7.03□□□□□ -1.28
ZEB1-217ENST00000559858 PPM1HQ9ULR3 514 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 TELO2Q9Y4R8 837 aa7.03□□□□□ -1.28
ZEB1-217ENST00000559858 ROBO3Q96MS0 1386 aa7.02□□□□□ -1.28
ZEB1-217ENST00000559858 TRIM43BA6NCK2 446 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 POC1B-GALNT4F8VUJ3 575 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 FCHO1O14526 889 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 WDR46O15213 610 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 SLC37A4O43826 429 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 ZBED4O75132 1171 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 MTA2O94776 668 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 USP1O94782 785 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TGDSO95455 350 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 CLPTM1O96005 669 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 DLATP10515 647 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 PORP16435 677 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 SMARCA1P28370 1054 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 GCAP28676 217 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 CLCN2P51788 898 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 MTTPP55157 894 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 GEMIN4P57678 1058 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TBL3Q12788 808 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 KIF22Q14807 665 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TRIP13Q15645 432 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 DNAL1Q4LDG9 190 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 ANKRD20A4Q4UJ75 823 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 SBK1Q52WX2 424 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 HYIQ5T013 277 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 C1orf146Q5VVC0 180 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 GRAMD4Q6IC98 578 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 CYP4F22Q6NT55 531 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 LRRC8BQ6P9F7 803 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 UGT2A3Q6UWM9 527 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 DNAJC14Q6Y2X3 702 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TRIM67Q6ZTA4 783 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 RAPH1Q70E73 1250 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 SLF2Q8IX21 1173 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 CEP70Q8NHQ1 597 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 SPIRE2Q8WWL2 714 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 MTBPQ96DY7 904 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 ZFRQ96KR1 1074 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TMEM120AQ9BXJ8 343 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 CRNKL1Q9BZJ0 848 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 VPS11Q9H270 941 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 ZHX3Q9H4I2 956 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 C17orf75Q9HAS0 396 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 FBXO6Q9NRD1 293 aaPredicted RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 IL17RBQ9NRM6 502 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 THEGQ9P2T0 379 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 DMTF1Q9Y222 760 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 R3HDM2Q9Y2K5 976 aaKnown RBP7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TMED5Q9Y3A6 229 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 TMEM247A6NEH6 219 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 ERVV-2B6SEH9 535 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 KLRF2D3W0D1 207 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 E9PBE3 544 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 MAGEB3O15480 346 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 CLDN3O15551 220 aa7.02□□□□□ -1.29
ZEB1-217ENST00000559858 PDE5AO76074 875 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms