RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PI15O43692 258 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 TBC1D4O60343 1298 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 PIGRP01833 764 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 RHOP08100 348 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 PAX3P23760 479 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 TXLNAP40222 546 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 CUL4AQ13619 759 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 MRPL58Q14197 206 aaKnown RBP13.35□□□□□ -0.27
SPG11-219ENST00000559822 KARSQ15046 597 aaKnown RBP13.35□□□□□ -0.27
SPG11-219ENST00000559822 ANGPT1Q15389 498 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 SEZ6Q53EL9 994 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 IQCEQ6IPM2 695 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 USP37Q86T82 979 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 CD302Q8IX05 232 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 NPAS3Q8IXF0 933 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 LEMD2Q8NC56 503 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 ITFG1Q8TB96 612 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 DDX12PQ92771 950 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 NKD2Q969F2 451 aaPredicted RBP13.35□□□□□ -0.27
SPG11-219ENST00000559822 MSTO1Q9BUK6 570 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 CCSER1Q9C0I3 900 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 ZHX3Q9H4I2 956 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 RPF1Q9H9Y2 349 aaKnown RBP13.35□□□□□ -0.27
SPG11-219ENST00000559822 BLOC1S4Q9NUP1 217 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 HCFC1R1Q9NWW0 138 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 CCDC39Q9UFE4 941 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 AFF4Q9UHB7 1163 aaKnown RBP13.35□□□□□ -0.27
SPG11-219ENST00000559822 SIT1Q9Y3P8 196 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
SPG11-219ENST00000559822 MEFVO15553 781 aaPredicted RBP13.34□□□□□ -0.27
SPG11-219ENST00000559822 MICAL2O94851 1124 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 CPB1P15086 417 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 PRKCQQ04759 706 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 YWHAHQ04917 246 aaPredicted RBP13.34□□□□□ -0.27
SPG11-219ENST00000559822 MCM6Q14566 821 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 KRI1Q8N9T8 703 aaKnown RBP13.34□□□□□ -0.27
SPG11-219ENST00000559822 BEST2Q8NFU1 509 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 ING5Q8WYH8 240 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 STK17AQ9UEE5 414 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 DOCK6Q96HP0 2047 aa13.34□□□□□ -0.27
SPG11-219ENST00000559822 A0A0B4J269 797 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 PRR23AA6NEV1 266 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 M0QZQ0 153 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 ECI2O75521 394 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 DDIT3P35638 169 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 STARD6P59095 220 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 GPC5P78333 572 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 GTF2BQ00403 316 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 ADCY1Q08828 1119 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 PLD1Q13393 1074 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 MLF2Q15773 248 aaPredicted RBP13.33□□□□□ -0.28
SPG11-219ENST00000559822 ZBTB6Q15916 424 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 ENOX2Q16206 610 aaKnown RBP13.33□□□□□ -0.28
SPG11-219ENST00000559822 CYP4A22Q5TCH4 519 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 SLFN12LQ6IEE8 588 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 DSTYKQ6XUX3 929 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 PDZD4Q76G19 769 aaPredicted RBP13.33□□□□□ -0.28
SPG11-219ENST00000559822 MAP4K3Q8IVH8 894 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 HVCN1Q96D96 273 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 ZNF512Q96ME7 567 aaPredicted RBP13.33□□□□□ -0.28
SPG11-219ENST00000559822 CORO1BQ9BR76 489 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 RPP25Q9BUL9 199 aaKnown RBP13.33□□□□□ -0.28
SPG11-219ENST00000559822 HAPLN2Q9GZV7 340 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 ST6GALNAC4Q9H4F1 302 aa13.33□□□□□ -0.28
SPG11-219ENST00000559822 ZFHX2Q9C0A1 2572 aaPredicted RBP13.32□□□□□ -0.28
SPG11-219ENST00000559822 KANSL1LA0AUZ9 987 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 OR6C75A6NL08 312 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 FAM189A1O60320 539 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 OAZ2O95190 189 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 ADRB2P07550 413 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 ODC1P11926 461 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 TNFSF9P41273 254 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 AARSP49588 968 aaKnown RBP eCLIP13.32□□□□□ -0.28
SPG11-219ENST00000559822 POU5F1Q01860 360 aaKnown RBP13.32□□□□□ -0.28
SPG11-219ENST00000559822 GRIN1Q05586 938 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 SPAG1Q07617 926 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 SLC5A9Q2M3M2 681 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 SPATA1Q5VX52 437 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 PJA1Q8NG27 643 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 ELSPBP1Q96BH3 223 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 MCRS1Q96EZ8 462 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 KXD1Q9BQD3 176 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 SEMA4AQ9H3S1 761 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 ASB7Q9H672 318 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 ASAH2Q9NR71 780 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 SEL1LQ9UBV2 794 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 CPSF3Q9UKF6 684 aaKnown RBP13.32□□□□□ -0.28
SPG11-219ENST00000559822 DERAQ9Y315 318 aa13.32□□□□□ -0.28
SPG11-219ENST00000559822 NOTCH4Q99466 2003 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 SEC24AO95486 1093 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 DCNP07585 359 aaKnown RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 CEBPBP17676 345 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 TYMPP19971 482 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 NMT1P30419 496 aaKnown RBP13.31□□□□□ -0.28
SPG11-219ENST00000559822 MAGEA9P43362 315 aa13.31□□□□□ -0.28
SPG11-219ENST00000559822 TWF1Q12792 350 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms