RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 LSM14BQ9BX40 385 aaKnown RBP17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 TRIM6Q9C030 488 aaPredicted RBP17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 DEF6Q9H4E7 631 aa17.08■□□□□ 0.33
CDC42BPB-204ENST00000559043 TTC3P53804 2025 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 AKR1B10O60218 316 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 CXCL8P10145 99 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 DLG4P78352 724 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 KCNH2Q12809 1159 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 IKBKEQ14164 716 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 C1orf220Q5T0J3 134 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 TMCO2Q7Z6W1 182 aaPredicted RBP17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 TRIM58Q8NG06 486 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 MFSD14AQ96MC6 490 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.08■□□□□ 0.321e-10■■■■■ 27.7
CDC42BPB-204ENST00000559043 KLK14Q9P0G3 267 aa17.08■□□□□ 0.32
CDC42BPB-204ENST00000559043 MICAL3Q7RTP6 2002 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 TRIP11Q15643 1979 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 SERPING1P05155 500 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 TUBBP07437 444 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 CLTAP09496 248 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 PSMC2P35998 433 aaKnown RBP17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 PLA2G4AP47712 749 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 GABPB1Q06547 395 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 PPIGQ13427 754 aaKnown RBP eCLIP17.07■□□□□ 0.326e-7■□□□□ 10.9
CDC42BPB-204ENST00000559043 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 DPY19L2P1Q6NXN4 242 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 ALKAL1Q6UXT8 129 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 FAM186BQ8IYM0 893 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 RNF169Q8NCN4 708 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 GANQ9H2C0 597 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 ARMCX3Q9UH62 379 aaPredicted RBP17.07■□□□□ 0.32
CDC42BPB-204ENST00000559043 MACROD2A1Z1Q3 448 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 ZNF233A6NK53 670 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 KIAA0391O15091 583 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 RECQL4O94761 1208 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 LDHAP00338 332 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 POLR2FP61218 127 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 DEFB103AP81534 67 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 CYP24A1Q07973 514 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 GSTCDQ8NEC7 633 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 ZMAT2Q96NC0 199 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 ACAP3Q96P50 834 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 PNKPQ96T60 521 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 NLRC4Q9NPP4 1024 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 MIOSQ9NXC5 875 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 AIPL1Q9NZN9 384 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 CXXC1Q9P0U4 656 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 NR2E3Q9Y5X4 410 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 LACTBL1A8MY62 500 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 SASH3O75995 380 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 FGBP02675 491 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 PFKMP08237 780 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 MCCD1P59942 119 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 BRSK2Q8IWQ3 736 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 TXLNBQ8N3L3 684 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 NOA1Q8NC60 698 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 RPGRIP1Q96KN7 1286 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 MKNK1Q9BUB5 465 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 METTL14Q9HCE5 456 aaKnown RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 PLCB1Q9NQ66 1216 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 RBAKQ9NYW8 714 aaPredicted RBP17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 JRKLQ9Y4A0 524 aa17.06■□□□□ 0.32
CDC42BPB-204ENST00000559043 PTPRJQ12913 1337 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 ANK1P16157 1881 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 TACC1O75410 805 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 FGFR1P11362 822 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 MAGEA1P43355 309 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 ZNF516Q92618 1163 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 CCDC127Q96BQ5 260 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 FAM212AQ96EL1 285 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 CRACR2AQ9BSW2 395 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 FUT8Q9BYC5 575 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 UBXN6Q9BZV1 441 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 C1orf112Q9NSG2 853 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 PARP2Q9UGN5 583 aa17.05■□□□□ 0.32
CDC42BPB-204ENST00000559043 H0YGN5 161 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 TULP1O00294 542 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 MAPK13O15264 365 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 ITGA4P13612 1032 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 PRLRP16471 622 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 GATMP50440 423 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 RAB27AP51159 221 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 GFPT1Q06210 699 aaPredicted RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 CKAP4Q07065 602 aaKnown RBP17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 LONRF2Q1L5Z9 754 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 CLLU1OSQ5K130 101 aa17.04■□□□□ 0.32
CDC42BPB-204ENST00000559043 SNX27Q96L92 541 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms