RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 LPAL2Q16609 132 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 ZNF568Q3ZCX4 644 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 LAIR1Q6GTX8 287 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 POTEHQ6S545 545 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 PRR23BQ6ZRT6 265 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 CELF5Q8N6W0 485 aaKnown RBP16.79■□□□□ 0.28
CPNE6-208ENST00000558795 CEP120Q8N960 986 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 LMAN1LQ9HAT1 526 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 POLD4Q9HCU8 107 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 ZNF334Q9HCZ1 680 aaPredicted RBP16.79■□□□□ 0.28
CPNE6-208ENST00000558795 PARD6AQ9NPB6 346 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 RBM19Q9Y4C8 960 aaKnown RBP16.79■□□□□ 0.28
CPNE6-208ENST00000558795 PIAS3Q9Y6X2 628 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 EPG5Q9HCE0 2579 aa16.79■□□□□ 0.28
CPNE6-208ENST00000558795 F5P12259 2224 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 OR52Z1P0C646 297 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 TDGF1P13385 188 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 TGM1P22735 817 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 SAFBQ15424 915 aaKnown RBP eCLIP16.78■□□□□ 0.28
CPNE6-208ENST00000558795 CTXN3Q4LDR2 81 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 TPGS2Q68CL5 300 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 HAUS3Q68CZ6 603 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 VITQ6UXI7 678 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 MAMSTRQ6ZN01 415 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 DEPDC1BQ8WUY9 529 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 SMARCD2Q92925 531 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 ZNF512Q96ME7 567 aaPredicted RBP16.78■□□□□ 0.28
CPNE6-208ENST00000558795 CDT1Q9H211 546 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 BHMT2Q9H2M3 363 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 TRPV5Q9NQA5 729 aa16.78■□□□□ 0.28
CPNE6-208ENST00000558795 PHLPP2Q6ZVD8 1323 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 COL4A2P08572 1712 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 CCDC169A6NNP5 214 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 ZNF263O14978 683 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 SEC24AO95486 1093 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 MYL4P12829 197 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 MUTP22033 750 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 CCT6AP40227 531 aaKnown RBP16.77■□□□□ 0.28
CPNE6-208ENST00000558795 CCR2P41597 374 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 XKR4Q5GH76 650 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 ZNF280DQ6N043 979 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 MAP4K3Q8IVH8 894 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 LEMD2Q8NC56 503 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 NETO1Q8TDF5 533 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 ACAP3Q96P50 834 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 MRPL4Q9BYD3 311 aaKnown RBP16.77■□□□□ 0.28
CPNE6-208ENST00000558795 ASAH2Q9NR71 780 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 FBXL5Q9UKA1 691 aa16.77■□□□□ 0.28
CPNE6-208ENST00000558795 ACACBO00763 2458 aa16.77■□□□□ 0.27
CPNE6-208ENST00000558795 CITO14578 2027 aa16.77■□□□□ 0.27
CPNE6-208ENST00000558795 LRP3O75074 770 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 RETP07949 1114 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 CPB1P15086 417 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 PDCP20941 246 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 RPL9P32969 192 aaKnown RBP16.76■□□□□ 0.27
CPNE6-208ENST00000558795 MCM4P33991 863 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 VIPR2P41587 438 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 CXCL12P48061 93 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 TWF1Q12792 350 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 ZNF174Q15697 407 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 ALKAL1Q6UXT8 129 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 HS6ST3Q8IZP7 471 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 APPL2Q8NEU8 664 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 ZSCAN18Q8TBC5 510 aaPredicted RBP16.76■□□□□ 0.27
CPNE6-208ENST00000558795 CSGALNACT1Q8TDX6 532 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 ZSWIM3Q96MP5 696 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 ACO2Q99798 780 aaKnown RBP16.76■□□□□ 0.27
CPNE6-208ENST00000558795 TCHPQ9BT92 498 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 SLITRK6Q9H5Y7 841 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 AFF4Q9UHB7 1163 aaKnown RBP16.76■□□□□ 0.27
CPNE6-208ENST00000558795 MAFFQ9ULX9 164 aa16.76■□□□□ 0.27
CPNE6-208ENST00000558795 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.76■□□□□ 0.27
CPNE6-208ENST00000558795 NRG2O14511 850 aaPredicted RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 ADRB1P08588 477 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 HARSP12081 509 aaKnown RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 PDIA4P13667 645 aaKnown RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 KCNE1P15382 129 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 CCNE1P24864 410 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 PEX3P56589 373 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 SATB1Q01826 763 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 SIM2Q14190 667 aaPredicted RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 MRPL58Q14197 206 aaKnown RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 LARP1BQ659C4 914 aaKnown RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 MFSD6LQ8IWD5 586 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 YAF2Q8IY57 180 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 FBXO18Q8NFZ0 1043 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 ZMAT2Q96NC0 199 aaKnown RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 CEP72Q9P209 647 aa16.75■□□□□ 0.27
CPNE6-208ENST00000558795 PDCD11Q14690 1871 aaKnown RBP16.75■□□□□ 0.27
CPNE6-208ENST00000558795 RALGAPA1Q6GYQ0 2036 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.74■□□□□ 0.27
CPNE6-208ENST00000558795 H3BQV1 296 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 SLC30A4O14863 429 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 MCF2P10911 925 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 GJA1P17302 382 aa16.74■□□□□ 0.27
CPNE6-208ENST00000558795 MARCKSP29966 332 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms